Gene Pars_0065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0065 
SymbolcysS 
ID5054543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp52072 
End bp53502 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content59% 
IMG OID640467645 
Productcysteinyl-tRNA synthetase 
Protein accessionYP_001152334 
Protein GI145590332 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0215] Cysteinyl-tRNA synthetase 
TIGRFAM ID[TIGR00435] cysteinyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGATAT ACAACACGGC CACGAGACAG CTGGAGGAGT TCGTCACCTA CACCCCCAGA 
CTCGCCCGGG GCTATGTATG CGGGATAACG CCCTACGACA GCGTCCACGT GGGGCACGGC
AGAGTCTACG TCTTCTTCGA CATGTTCAGG AGGTATCTAG AAGCCCAGGG CTACGAGGTG
AGGCTAGTGA TAAACTTCAC CGACATAGAC GACAAGATTA TAAACAGGGC GAGGGAGGAG
TTCGGCGCGG AGGCGTACAA GAGGTGGAGG GAGGTGCCGG AGAGGTACAT CGCCGAGTTT
TTCGAAATGA GCAAGAGGCT CTTCATCAAG CCGGCCTACG CCTACCCCAA AGTAACAGAG
AACGTGGAGG ACATGGTCTC CTGGATAAAG GCGCTGGTGG AGAAGGGCTA CGCCTACACG
GCGCCCGACG GCTCTGTCTA CTTCGAGGTG GGGAAGGTGC CTAACTACGG CGTCCTCTCC
CGGCAGAGGA TAGAAGAGCT GATGGCAGGT GCGCGGGTGG AGCCCGAGCC CGGCAAGAGG
AACCCCCTCG ACTTCGCCCT GTGGAAGAGC TGGACTCCGG GAGAGCCCTG GTGGGAGTCG
CCCTGGTGCC CCGGGCGGCC CGGCTGGCAC CTCGAATGCG TGGTCATGTC CACAAAACAC
TTGGGCGTGC CATTCGACTT CCACGGCGGA GGCGCCGACT TGATATTCCC ACACCACGAA
AACGAGATAG CCATTGCGAA GGCATACTTC GGCGTGGACA ACTTCGCGAG GTACTGGATA
CACGTCGGCT ACCTCACCGT GAGGGGGGAG AAGATGTCTA AGTCCCTGGG CAACGTCGTG
ACGCTTAGGG AGGCGCTCTC GAAGTACAGC GGTGAGGCGC TGAGGCTGGC CTACGCCATG
AGCCACTACA GAAAGCCCAT GGAATTCAGC TACGAGGTGT TGGACCAGGC CGAGGAGATG
GCCAAGACCA TATACACCGC GTACGACGAG CTGGGACAGG CGGTGGGAGA CGCCGGCGAG
GAGGACAAAG AGGCGCTGGA CTACGGGAGG TACGTCGAGG AGTTCTACGC CGCGCTGGAA
GACGACTTCT CCACGCCGCA AGCCGCCCAG CAGTTCTACG GCCTAGCCCG CTACATAATC
TCTACGGTGC TCCACAAAAT AGACAAGATC TCGCGCAACA CGGCGCTTAG TATACTCTCG
CAGTATGTAA AAATGGCAGA CATCCTCGGA GTCCTCGAGC GGAGAGAGGT GCCTAAAGAA
GTGGAGGAGG CGGTTAAAGC CGCCGTGGAG GTTAGGGCCA AGCTCAGAAA GGAGAGGCAG
TACCAACTCG CCGACTACAT ACGGGAGAGG CTGGCGGGCA TAGGCGTAGA GCTCCACGAC
TTCGGGCAGA GAACCTACTA CACATACAGG AGGGGTAACA GATTGCGTTG A
 
Protein sequence
MRIYNTATRQ LEEFVTYTPR LARGYVCGIT PYDSVHVGHG RVYVFFDMFR RYLEAQGYEV 
RLVINFTDID DKIINRAREE FGAEAYKRWR EVPERYIAEF FEMSKRLFIK PAYAYPKVTE
NVEDMVSWIK ALVEKGYAYT APDGSVYFEV GKVPNYGVLS RQRIEELMAG ARVEPEPGKR
NPLDFALWKS WTPGEPWWES PWCPGRPGWH LECVVMSTKH LGVPFDFHGG GADLIFPHHE
NEIAIAKAYF GVDNFARYWI HVGYLTVRGE KMSKSLGNVV TLREALSKYS GEALRLAYAM
SHYRKPMEFS YEVLDQAEEM AKTIYTAYDE LGQAVGDAGE EDKEALDYGR YVEEFYAALE
DDFSTPQAAQ QFYGLARYII STVLHKIDKI SRNTALSILS QYVKMADILG VLERREVPKE
VEEAVKAAVE VRAKLRKERQ YQLADYIRER LAGIGVELHD FGQRTYYTYR RGNRLR