Gene Pars_0025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0025 
Symbol 
ID5054602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp17988 
End bp19274 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content55% 
IMG OID640467605 
Productphosphomannomutase 
Protein accessionYP_001152294 
Protein GI145590292 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGTTT TTAAGGCCTA TGATATAAGA GGGGTGGTAG ACCGCGAGTT GACAATGGAG 
CTTGTGGAAA AAATCGGCTA CGCGATTTCC AAGTTCTTCG GCGGAGGCGA CATTATAGTG
GGGATGGACG TGAGGACGCA CTCTTTTAGA ATTGCGGAGG CTCTTGCCCG GGGTCTCCTC
TCCGGAGGCG ACGTCATTTT CATCGGAACC TCTACGACGC CGGTGACGCA CTATGCGTCG
TACGTGTTGC AGAGACCTGC CGTGATGATC ACAGCCTCGC ACAACCCGCC TGAGTACAAC
GGTATGAAGA TCATGAAGAG CGGAGGCCTC GACTTGGAGA GCCAAGAAAT TCAGCGACTT
GCAACTATGC TAGAGGGGCC ACCTGCGGAG AAGCGCGGCG TAGTGCGGGT TGCTGACGCG
CTGTCCCGCT ACATGGACTA CATGTCGGGC AGATTCGGGG AGCTCGGTCT CTCAGCCGGC
TTCGACCCGG CTAATGCGGC CGGCGTGGTG CTAAAGCCTT TGCTTAAGAA GGTGTTTCAA
AAGGTGGTGG CAATAAACGA CGTGCCGGAC GGTCGCTTCC CAGCGCACCT CCCCGACCCG
GAGAAGGCGG AGAATCTACA ACAGCTCCGC GCCTTGGTTA AGGAGAACAA CCTAGACGTA
GGCATAGCTC TTGACGGGGA TTGCGATAGA GTTGGCTTAG TCACAGCGAG GGGGGAGATC
TTCAGACCCG AGAAGATTGT ATACGCGTTG CTAAATTATC TAGCCAAGCC AGGCGACGTC
GTAGTCCTAG ACGTGACAAT GCCCCTTTAC CTAGAAAAAG TAGCCGAAGA GAGGGGGGTA
AAGGTGGTTA GACAGAGAGT TGGCCACAGC TTCCAGAAGC CAACTGCTGT CAAATACAAC
GCGCTCTTCT GGGCGGAGTA CAGCGGCCAC ATAGGCTTTA GGGAGCACAA CTACTTCGAC
GACGGTATCT ACGCGGCGTT GAAGTTGCTC GCTACGTTGG GCGACGCCGG CGTTACCATG
GATGAGGTAT TAGAGAAAGC GCCGAAGGTG TACGAAGAGC GTGTAGACAT TAGGGCAACC
GATCCTAGAA GGGCTGTGGA GGAGGCCAAA AAGCGGGCGG CTAACTTAGA GTTCCACGAG
CTGGACGGTC TAGACATACG CACTAAGGAC GGAAGAGTCT TAATTAGGCC GAGCAATACC
GAGCCCGTTA TCCGCGTGAA AATTGAAAGC AACACAAAAG ACGGGTTTGA CAGACTTAAG
TCGCTGGTGG CTCAGCTACT GCCATAG
 
Protein sequence
MSVFKAYDIR GVVDRELTME LVEKIGYAIS KFFGGGDIIV GMDVRTHSFR IAEALARGLL 
SGGDVIFIGT STTPVTHYAS YVLQRPAVMI TASHNPPEYN GMKIMKSGGL DLESQEIQRL
ATMLEGPPAE KRGVVRVADA LSRYMDYMSG RFGELGLSAG FDPANAAGVV LKPLLKKVFQ
KVVAINDVPD GRFPAHLPDP EKAENLQQLR ALVKENNLDV GIALDGDCDR VGLVTARGEI
FRPEKIVYAL LNYLAKPGDV VVLDVTMPLY LEKVAEERGV KVVRQRVGHS FQKPTAVKYN
ALFWAEYSGH IGFREHNYFD DGIYAALKLL ATLGDAGVTM DEVLEKAPKV YEERVDIRAT
DPRRAVEEAK KRAANLEFHE LDGLDIRTKD GRVLIRPSNT EPVIRVKIES NTKDGFDRLK
SLVAQLLP