Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_42289 |
Symbol | AOX1 |
ID | 5006452 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009373 |
Strand | - |
Start bp | 108566 |
End bp | 110518 |
Gene Length | 1953 bp |
Protein Length | 628 aa |
Translation table | |
GC content | 57% |
IMG OID | 640421873 |
Product | amine oxidase |
Protein accession | XP_001422439 |
Protein GI | 145356439 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1231] Monoamine oxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 0.317329 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00000000282984 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGATCGCGC GCGCGGCGAA AAACGCGCCG CCGCCGCGCG CTCCGCGACC GCTGCGACCG GAGGACGTGG CGGACTTGGA AATTGCGATT GAATTAAACC TCGAGACCGA CGGCTTGTCC GACGTCGAGC GCGCGTTCCT GCCGCCGGGC GAATCCCACA ACGACGGCGA TTTCATCGCG ATCAGGAACG CGCTCATCGT CAAATGGCGA GCTAAACCGC GCGAGTATTT GTCCGCGACG GCGGCGGCGG ACATGTTCAA GAACAAATTC ATCAACCTCG CGCACGGGGT GCACAGATAT CTCACGATGT TCGGATACAT CAACTACGGC GTCATGCGCA CGGCGTCCAA GTTTGAAGAA TTCGCGGAGA AGAAAGGGAC CTCGCAAAAG ATGTCCGTCG TCGTCATCGG CGCCGGTATC TCCGGACTCG CCGCGGCGAA ACACCTGAAA AATCTTGGGC ACAGAGTGGT GGTTCTGGAA TCGAGCGAGC GTTTGGGAGG GCGCGTGGAC ACGCGCGAGT TTCCGGCTGA GTTTATCGAC GAGGCGGGGA AGGAAACGAC GAAGACTAAA AATGTCACCG AGAGCGACAA AGACGTCAAG AAAGTGTGGG CCGATCTCGG AGGAAGTATT TTGAGCGGGT CGAATGGCAA CCCGCTCTGC GTCGTCGCGC GTCAACTCGG AATCAAGCCG CACATCATTC AGCCCGAGTG CCCGTTGTAC GACCGCAACG GCGACACGGT CGATAGCGAA GTGGACGAGA TGGTGGAGAA AAATTTCAAC AAAATACTGG AAGACATGTC GTTCTTTCGC GTGGCGATGG ATCGACAAAT CGCCAACGCC TCATCGCTCG GGCGCGAACT CGAGAAGAGA ATAAATGTTG AGCTCGAGAA GTTGCCGATG GAGACTAGAA ACGCGGCCAA GGACGTGCAC AACTGGCACA TCGCGAATTT GGAATTCGCC AACGCGTCGC AGGCGAAAGA GTTGTCGTTG ATGCAGTGGG ATCAAGACGA CGCGTACGAT TTCACCGGTA ATCACGTCGT CGTGCCGGGT GGTAACGTGC GTTTCATCGA CGCCCTGAGC AAGGATTTAC GAGTTTGGTA TCGTCATCGC GTGACATCCA TCACCGACGC TCAGTCGCTC GGCGGCAAGG GCGTCATCGT GCACTGCGGT CGAGAAGTCG ACATCATCGC CGACTGCGTC CTCGTCACCG TTCCGCTGGG TGTTTTGAAG CGCGGCGTCA TTTCCTTCAT CCCGGAGTTG CCTCATCGCA AGCTTCAAGC CATAGAGAAC ATAAATTTCG GCGTCTTGAA CAAGGTCATC TTGGTCTTTG AAAAAAGATT TTGGGACGAA AAGTGCGACA CGTTTGGTTT CGTGCAGTCG CACACGCGCG ATCGCGGTCG ATACTTTTTG ATATATTCCC ACAACAAGGG CGACGAAAAC GTCATCCTGG CGCTTTGCGC CGGGGAAGCC GCGATCGAAG TCGAAAGCCG CGAAGACGAC GAGGTGGTGG AAGATTTGTT GGCGCACTTG CGATGCGCTT TCCCAAAGGC AGACGTGGGC AAGCCGGTGG CGAGTCACGT CACGCGGTGG GGGAAGGATG AAAACACGTT CGGCGCCTAC AGCTCGTGCT CGACGAGAGC CACCGGGGAC GATTATGAAG AGATGAGCGA ACCGGTGGGG AACATCCACT TCAGCGGCGA AGCGACGACG AGGCACTATC CGGCGACGAT GCACGGGGCG TGGATCACGG GCATGCGCGA GGCGGGGCGA ATCGCGATGA AGAGCGATAT CACGAGTCCA ATCGACAAGC TCACCGATAT CACCGTGGCG ATCAATAATC TTCAGGGAAC GACGTATAAG AAAGAACCCG CCCCGCCCGC TCCCGCGACG ACGGAGCCAG TCGAGACGGG CGGAGAAGAA AATAACGCTC AAGACGCCAA CAAGAAGGAA TGA
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Protein sequence | MIARAAKNAP PPRAPRPLRP EDVADLEIAI ELNLETDGLS DVERAFLPPG ESHNDGDFIA IRNALIVKWR AKPREYLSAT AAADMFKNKF INLAHGVHRY LTMFGYINYG VMRTASKFEE FAEKKGTSQK MSVVVIGAGI SGLAAAKHLK NLGHRVVVLE SSERLGGRVD TRDDKDVKKV WADLGGSILS GSNGNPLCVV ARQLGIKPHI IQPECPLYDR NGDTVDSEVD EMVEKNFNKI LEDMSFFRVA MDRQIANASS LGRELEKRIN VELEKLPMET RNAAKDVHNW HIANLEFANA SQAKELSLMQ WDQDDAYDFT GNHVVVPGGN VRFIDALSKD LRVWYRHRVT SITDAQSLGG KGVIVHCGRE VDIIADCVLV TVPLGVLKRG VISFIPELPH RKLQAIENIN FGVLNKVILV FEKRFWDEKC DTFGFVQSHT RDRGRYFLIY SHNKGDENVI LALCAGEAAI EVESREDDEV VEDLLAHLRC AFPKADVGKP VASHVTRWGK DENTFGAYSS CSTRATGDDY EEMSEPVGNI HFSGEATTRH YPATMHGAWI TGMREAGRIA MKSDITSPID KLTDITVAIN NLQGTTYKKE PAPPAPATTE PVETGGEENN AQDANKKE
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