| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2359 |
|---|
| Symbol | |
|---|
| ID | 4955955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 2582506 |
|---|
| End bp | 2583711 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640181531 |
|---|
| Product | histidine--tRNA ligase |
|---|
| Protein accession | YP_001113694 |
|---|
| Protein GI | 134300198 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3705] ATP phosphoribosyltransferase involved in histidine biosynthesis |
|---|
| TIGRFAM ID | [TIGR00443] ATP phosphoribosyltransferase, regulatory subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATCAA GCAGATTTGG TCGGCTGGCT CCCGGTGTCA GGGATGTACT GCCCGCAGAA
GCTCATTTAA TGCGTGGGCT AAAAGAAAAA TTCACCAAAC TGGTGGAGAC CTGGGGGTAT
AAAGAAGTTG TAACCCCCAC CTTTGAATAC ATGGAAAATC TGGCCTCTGA GGAACTACAG
GAAGAAAAGT TTTTTAAGTT CCTGGACCGG CAGGGCCATT TAATGGCTCT ACGCCCGGAT
ATGACACGTC CAATGGCTCG TTTGGTGGCC ACCCGTATGA AAGGGATCAC ACCACCCCTA
AGACTTTTTT ACTTGGCCAA TGTTTTCAAT TATGAACAGC CCCAGGTAGG TCGCCAAAGG
GAGTTTTATC AGGCAGGGGT GGAATTAATG GGCCCTTCGT CGCCTGAAGC TGATGCTGAA
GTGGTGGCAA TGGTGGCTGA ATATTTAATG CAGACCGGAT TAGCCGATTT TCAAATTAGC
ATTGGTAATG TAGGCATATT TCATGGCTTA GTAAAGCAAC TGGGTCTGCC CAAGGAAGTA
GCCCAGGAAC TGAAAGAAGC CCTGGGAAAT AAAGATTTTG TTAAGGTGGA AGAAATTCTT
GGCTCCCACG CGGCCACACC GGAGGAAGCT CGCCGGACAC TGGATCTTAT TGAATTGCGT
GGCGGGCCGG AAATATTAGA CCGGGCATTT GGGTTGGCCC AACCAGGGCC AGCTGCTGAT
GCCATTGATA ATCTTCGTCA ACTGTACTGG GGATTAACCT GTTATGGCGT GGAAAGGCAT
ATAACCCTGG ATTTAGGTTT GTTAAGGGGA CTGGATTATT ATACTGGTCT GGTATTTGAA
GGTTATACCG TAGCCATGGG CTTTCCCATT TGTGGTGGAG GTCGCTACAA TCAACTTTTG
GCAAAATTTG GTTTACCCAT GCCTGCCACG GGCTTTGCGG TTAATCTAGA ACGGGTTTTG
GTGGCACTGG AGCGTCTACA GGGTCCCCCA AGGGAACCAG TACCGGATGT ACTGGTGGCT
TGGGAGGATA ATAGTCTGGC TAATGCCCTC CAATGTGTAA AGGAATTAAG ATACCAGGGA
CTAAAGGTGG TTACTGCCAT GTTCGAATAT CCACCGGCAA AGGCCAAGGC CGAGGCCAGA
AGCCTGGGAG CTTCTAGGGT GATCTATTTT GATAAAGAAG GCAAAAGTGA GGAGTTAAGC
CTATAA
|
|---|
| Protein sequence | MTSSRFGRLA PGVRDVLPAE AHLMRGLKEK FTKLVETWGY KEVVTPTFEY MENLASEELQ
EEKFFKFLDR QGHLMALRPD MTRPMARLVA TRMKGITPPL RLFYLANVFN YEQPQVGRQR
EFYQAGVELM GPSSPEADAE VVAMVAEYLM QTGLADFQIS IGNVGIFHGL VKQLGLPKEV
AQELKEALGN KDFVKVEEIL GSHAATPEEA RRTLDLIELR GGPEILDRAF GLAQPGPAAD
AIDNLRQLYW GLTCYGVERH ITLDLGLLRG LDYYTGLVFE GYTVAMGFPI CGGGRYNQLL
AKFGLPMPAT GFAVNLERVL VALERLQGPP REPVPDVLVA WEDNSLANAL QCVKELRYQG
LKVVTAMFEY PPAKAKAEAR SLGASRVIYF DKEGKSEELS L
|
|---|
| |