| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1965 |
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| Symbol | |
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| ID | 4956373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2156194 |
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| End bp | 2160474 |
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| Gene Length | 4281 bp |
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| Protein Length | 1426 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640181132 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_001113308 |
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| Protein GI | 134299812 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01405] DNA polymerase III, alpha chain, Gram-positive type
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGTTT CACTCATCGA TGTGTTGGAT GATCAAAAAA TAGGGAAGAA TCTTTTAGAA
GTTGCAAAAC ATACTCAGGT TGTCAGTGTA GCTGTTAACA TTCGTAAGAG GCAGTGGAGG
TTAAGACTAA ACCTACACCG GCAAATATCC AATGAAGAAA TAAATTCTTT AAAGTCGGCC
CTGGCTACCA TTACACCGGG GCCAGTTTTA TTAGAGGTAG ATTTTCAGTT TGTCTCAACC
CAATCTATGG GTGAAGAAAT AAATTTTGAA TACCTGAAAG AAGAACTGAT TAAAAAATTC
CCGGTGGCCC GTTGTTGGTT ACAGAATACC CAGTGGGAAT GCAAGGGAAA AAAATTAGAA
ATTACCTTGC CCGATGAAGT AAGCTTGGAA CTCCTACGGG GTAAAAAGTG TGACTTGTTT
CTGGAAGGCT GTATAAAAAA TATCTACGGT CTTCAATACA AGGTACTTTT TCTGATGAAG
CAAAATGCTG ATACCAACGA TGAATGGTGC CAAACCCAGG ATGAAATGGA AAAAATCCTC
TGGCAAAAAC TTACTGCGGA AAAGGTAAGT GTGCAAAAGG AAAAGAAAAA TGGTAGCGCA
ACGGGGAATC TTGATGATGG GATAATAATT GGCAAACCAA TTAAAGGGGA GCCTAAACCC
ATTCATGAAA TTACCGAAGA AGAACGAAAC ATAATTGTAG AGGGTAAAGT TTTTGATGTA
GAAATTAAAC AACTAAAATC TGGCCGTCAA ATATTAACAT TTAACATTAC TGACAATACG
GACTCCATTG AGGTTAAAAA ATTTTTGGAA GAAGACGATA CAGAAACCAG TGAAAGACTT
AAAAACGGTA GCTGGGTTAT TGTGCGCGGA CCTGTACAGT ATGACAAATT TTCCCAAGAA
TTAACCGTGA TGGCTTACGA CATTAATCTA GGCACAGCTA AAGTAACAAA TCGCGATGAC
AAAGCAGCGG ACAAACGGGT GGAACTCCAC CTGCACACAA AGATGAGTTC TATGGATAGT
GTCATGAGTG CTGTTGATGC TGTTAAACAG GCAGCGGCCT GGGGACATCC TGCAGTGGCT
ATTACGGACC ATGGTGTTGT GCAGGCCTTT CCAGAGGCTT ATGCAGCAGC CAAAAAGGCG
GGCATAAAGC TCATCTATGG TGTAGAAGGC TATTTGATTG ACGACGGAAT TGCCACTGTG
GTTAGTATGA AACATAACGT TCCTTTACAG GGGACTGAAC ATGTTATCAT TGATTTTGAG
ACAACGGGTT TTTCTCCGCA AACTGATGAG ATTATTGAAA TCGGAGCTGT AAAATACTTA
AACGGTGAAG AAGTCGGTCG TTTTGGTACC CTTGTCAACC CCAAAAAAGA GATTCCCTTT
GAAGTTACTA AACTTACCGG AATAACCGAT GAAATGGTAA AGGACGCCCC AGATGGGAAA
GAAGCATTGA CTGCACTGAG TGAGTTTATG GGAGAGGCTG TTTTGGTTGC TCACAATGCC
TCCTTTGATC TTAGCTTTTT AAGGGTTGGT TTGCGTAAAT ATCTGAAACA GGAAGTGACA
AACCCTGCTA TTGATACGCT AGGTGTTGCT AGGGTATTGT TCCCTAATCT TAAAAACCAT
AAGCTAAATA CCCTGGTGAA GGAATTTAAA ATAGAGTTGA CCAATCATCA CCGTGCAGTG
GATGATGCGT CTGCTACCGC CAAACTATGG CAAATTTTTT TGCGAAAGCT AGCTGAACAA
GAGATCTCTG ACGTAAAAAC CTTAAGTGGG ATGGGCCAGG GAGTCAATCA AGAGAAACTT
AAATCAAGAC ATGTGACCAT ATTGGTGAAG GATGAGGTAG GGTTAAAAAA TCTTTATCAA
CTGATCACCC TTTCTCATCT CCGGTATTTT CACCGCCAGC CCCGTATACC ACGGCGGGAG
TTAGTAAAAT ACCGAGAAGG ATTGCTGATA GGGTCTGCCT GTGAGGCAGG GGAATTTTAC
CAGGCCCTTA TGGCAGGTGC ATCACAGGAA GAGCTGGAGG ACATTGCTTC ATTTTATGAC
TACCTGGAAA TTCAGCCCTT AGGCAATAAC GAGTTTATGA TTCGCACAGG ACAGGTAAAC
GGCGAAGAAG ATTTAAAGGA AATAAACAGA AAAATTGTTG CATTGGGGAG TAAATTAGGT
ATCCCTGTGG TAGCCACCGG GGACGTACAC TTCCTTAATC CAGAGGATGA AGTATACAGA
AGAATCCTCA TGGCAGGTAA AGGTTTTGAT GATGCAGATA ATCAGGCTCC ACTATATTTT
AAAACCACAG AAGAGATGCT TAAGGAGTTT TCTTACTTAG GCAGAGAGAC GGCTTTCCAG
GTTGTTGTTA GCAATCCTAG GAATATAGCT TCCATGATAC AAGCTTTTAA ACCAATTCCA
GACACATTAC ACCCTCCTTA CATTGAGGGA GCAGAACAAC AAATTACAGA TATGACATTA
CAACGTGCTA GGGAATTATA CGGCGAACCA CTACCGGAGG TGGTTCAACA AAGGGTGGAT
AAAGAATTAA AGTCCATTAT AGGCAATGGA TTTGCAGTCT TATATCTAAT TGCTCATAAG
TTAGTTAAAA AATCCCTGGA TGACGGATAT TTAGTAGGAT CCAGGGGATC AGTAGGCTCC
TCCCTTGTGG CAACCTTTAC CAATATAACG GAGGTAAACC CCCTGCCTCC TCATTATCGA
TGTCCCAATT GCCTAAACAG TGAGTTTTTA ATGGATGGTT CAGCAGGTTG TGGTGCGGAT
ATGCCGGATA AAAATTGTCC TAAATGCGGA ACAAACTATA TAAAGGATGG GCATGATATT
CCCTTCGAAG TGTTCCTTGG TTTCGATGGG GATAAAGTTC CTGATATTGA TCTAAACTTT
TCCGGAGATT ATCAACCCAG AGCACATAAA TATACAGAGG AATTATTTGG AAAGGATTAC
GTTTATAGAG CAGGTACTAT AGGTACAATC GCTGAAAAGA CAGCCTTTGG TTTTGTAAAA
AACTACTTTG AAGAACGGAA TATTAAAAAA CGAAGTGCCG AAATGAAGCG ACTGGTTCTG
GGCTGTGCTG GTGTAAAAAG AACAACCGGT CAGCACCCAG GGGGCCTAAT GGTCGTTCCT
AATAGTCTGG ATGTGCACAT GTTTACACCG GTTCAAAGAC CTGCGGATGA TGTAAAATCC
GATACCCGAA CAACACATTT TGACTATCAC TCCATTCATG ATAGTTTAGT TAAGCTTGAT
ATCCTGGGGC ACGATGATCC TACAGTGATT CGTATGTTGG AAGATTTAAC CAGCGTTAAT
GCCAGAGAAA TACCGTTGGA TGACCCAAAA ACCATGAGTT TATTTGCATC TACAGATGCT
CTGGGAGTTA CACCAGAGGA TATCCGTTCC CAGGTGGGGA CCTATGCGAT TCCGGAATTT
GGTACTAAAT TTGTTCGCCA GATGTTGGTC GATACAAAGC CCACGACATT TTCTGAACTG
GTCCGTATTT CGGGTTTTTC CCACGGTACA GATGTCTGGT TGAATAATGC ACAGGATCTA
ATTAAGGAAG GTACCTGTAA ACTTTCTGAA GCTATCTCCG CCCGTGATGA CATTATGGTC
TATCTAATTT ATCAGGGGTT ACCCCCTAAA CAAGCCTTTA AGATTATGGA GGGCGTGAGG
AAGGGTAAAG GGGTTAAAGA AGAGGATGCA GAGGCTATGA GGTCCCAAGG GGTGCCAGAG
TGGTATATTG AATCCTGTCG TAAAATTAAA TACATGTTTC CGAAGGCACA TGCCACTGCC
TATGTGATGA TGGCTTTTCG GATTGCTTGG TTTAAAGTTT ACCGCCCGGA GGCCTTTTAC
GCAGCTTATT TCACAGTGAG GGCAGATGAC TTTGATGCTG AATTAATGGT TTCGGGGCCT
AACAAGATTA AACAGGTAAT TGAGGAAATT GAAGAAAAGG GCAACGCGGC ATCTCAAAAG
GAAAAGAATA TGTTAACTAT CTTAGAGGTA GCGCTGGAAG CAAACTGTCG TGGAATTAAG
ATATTACCTG TCAATTTGGA AAAATCCGAT GCTACAAAGT TCCTTATAAC CCCTGAGGGA
CTATTGTCTC CCTTTGGTGG GCTACAGGGT GTGGGGGCCT CAGCTGCCAA AAATATTGTC
GCAGCCAGGG AACAAGCACC CTTTACTTCC ATTGATGATC TGAGAAACCG GGCTAAAATA
TCGAAAACGG TGATTGAAGT TTTACAAAAC CATGGTTGTT TGAACAACCT GCAGGAATCA
GATCAAATGT CTCTTTTTTA A
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| Protein sequence | MAVSLIDVLD DQKIGKNLLE VAKHTQVVSV AVNIRKRQWR LRLNLHRQIS NEEINSLKSA
LATITPGPVL LEVDFQFVST QSMGEEINFE YLKEELIKKF PVARCWLQNT QWECKGKKLE
ITLPDEVSLE LLRGKKCDLF LEGCIKNIYG LQYKVLFLMK QNADTNDEWC QTQDEMEKIL
WQKLTAEKVS VQKEKKNGSA TGNLDDGIII GKPIKGEPKP IHEITEEERN IIVEGKVFDV
EIKQLKSGRQ ILTFNITDNT DSIEVKKFLE EDDTETSERL KNGSWVIVRG PVQYDKFSQE
LTVMAYDINL GTAKVTNRDD KAADKRVELH LHTKMSSMDS VMSAVDAVKQ AAAWGHPAVA
ITDHGVVQAF PEAYAAAKKA GIKLIYGVEG YLIDDGIATV VSMKHNVPLQ GTEHVIIDFE
TTGFSPQTDE IIEIGAVKYL NGEEVGRFGT LVNPKKEIPF EVTKLTGITD EMVKDAPDGK
EALTALSEFM GEAVLVAHNA SFDLSFLRVG LRKYLKQEVT NPAIDTLGVA RVLFPNLKNH
KLNTLVKEFK IELTNHHRAV DDASATAKLW QIFLRKLAEQ EISDVKTLSG MGQGVNQEKL
KSRHVTILVK DEVGLKNLYQ LITLSHLRYF HRQPRIPRRE LVKYREGLLI GSACEAGEFY
QALMAGASQE ELEDIASFYD YLEIQPLGNN EFMIRTGQVN GEEDLKEINR KIVALGSKLG
IPVVATGDVH FLNPEDEVYR RILMAGKGFD DADNQAPLYF KTTEEMLKEF SYLGRETAFQ
VVVSNPRNIA SMIQAFKPIP DTLHPPYIEG AEQQITDMTL QRARELYGEP LPEVVQQRVD
KELKSIIGNG FAVLYLIAHK LVKKSLDDGY LVGSRGSVGS SLVATFTNIT EVNPLPPHYR
CPNCLNSEFL MDGSAGCGAD MPDKNCPKCG TNYIKDGHDI PFEVFLGFDG DKVPDIDLNF
SGDYQPRAHK YTEELFGKDY VYRAGTIGTI AEKTAFGFVK NYFEERNIKK RSAEMKRLVL
GCAGVKRTTG QHPGGLMVVP NSLDVHMFTP VQRPADDVKS DTRTTHFDYH SIHDSLVKLD
ILGHDDPTVI RMLEDLTSVN AREIPLDDPK TMSLFASTDA LGVTPEDIRS QVGTYAIPEF
GTKFVRQMLV DTKPTTFSEL VRISGFSHGT DVWLNNAQDL IKEGTCKLSE AISARDDIMV
YLIYQGLPPK QAFKIMEGVR KGKGVKEEDA EAMRSQGVPE WYIESCRKIK YMFPKAHATA
YVMMAFRIAW FKVYRPEAFY AAYFTVRADD FDAELMVSGP NKIKQVIEEI EEKGNAASQK
EKNMLTILEV ALEANCRGIK ILPVNLEKSD ATKFLITPEG LLSPFGGLQG VGASAAKNIV
AAREQAPFTS IDDLRNRAKI SKTVIEVLQN HGCLNNLQES DQMSLF
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