Gene Dred_1571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1571 
Symbol 
ID4958269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1709705 
End bp1710502 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content46% 
IMG OID640180744 
ProductABC transporter related 
Protein accessionYP_001112924 
Protein GI134299428 
COG category[R] General function prediction only 
COG ID[COG1101] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.865643 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTCAA TAGTGGGAAT TAGAAAAACC TTTAACCCTG GCAGTGTCAA TGAACGGTTG 
GCTTTGGCAG GATTATCCCT TCATTTACAA GCCGGTGATG TGGTGACAGT TATTGGCGGC
AATGGTGCAG GGAAATCCAC TTTGCTAAAC ATGGTTGCGG GTGTTCACCC TGTTGATGAA
GGTCGAATTA TCATCGAGAA TCAGGCAGTG GAACATCTAC CTGAACATAT AAGGGCATCC
TATATCGGTA GAGTTTTTCA GGACCCCATG ATGGGCACTG CTGCCTCCAT GACCATTGAA
GAAAACCTGG CAATGGCCGT AAGGCGTGGT TCCACACGCA AATTGAGGCG GGGGATCAGA
AGCAAGGATC GGCAATATTT TTGTGAACAG CTTGAACTAT TAGGGTTGGG TCTGGAAGAT
AGGTTGACCA CCCGGGTGGG TTTGCTGTCT GGCGGTCAGC GTCAAGCCTT AACTTTACTG
ATGGCTACGC TGGTACCACC CAAGCTTTTG TTGCTGGATG AACACACAGC AGCCCTGGAC
CCCAGTACTG CCCAAAAGGT ATTAGAGCTT ACAGAAAAAA TGATCAAAAA ACATAAACTA
ACTACCCTGA TGGTAACTCA CAATATGGAA GACGCCTTAC GTATTGGCAA CCGAACCATT
ATGATGCATG AAGGCCGCAT AATATTTGAC TTAAAAGGGG AACAAAGAAA AAATACGCGG
ATACCTGATT TACTGGAAAT GTTTAAGAAA GCCAGCGGCA GATCCATGGC CAATGACCGG
ATGCTATTGG CAAACTAA
 
Protein sequence
MLSIVGIRKT FNPGSVNERL ALAGLSLHLQ AGDVVTVIGG NGAGKSTLLN MVAGVHPVDE 
GRIIIENQAV EHLPEHIRAS YIGRVFQDPM MGTAASMTIE ENLAMAVRRG STRKLRRGIR
SKDRQYFCEQ LELLGLGLED RLTTRVGLLS GGQRQALTLL MATLVPPKLL LLDEHTAALD
PSTAQKVLEL TEKMIKKHKL TTLMVTHNME DALRIGNRTI MMHEGRIIFD LKGEQRKNTR
IPDLLEMFKK ASGRSMANDR MLLAN