| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0764 |
|---|
| Symbol | |
|---|
| ID | 4955767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 817125 |
|---|
| End bp | 818369 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640179937 |
|---|
| Product | aminotransferase, class V |
|---|
| Protein accession | YP_001112127 |
|---|
| Protein GI | 134298631 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
|---|
| TIGRFAM ID | [TIGR03402] cysteine desulfurase NifS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000561511 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAAAG TTTATTTCGA CCACTCAGCA ACAACTCCTG TTGATCCTGC TGTTGTAGAA
GAGATGATGA AATACTTAAC CGAACATTTC GGTAATCCCT CCAGCATCCA TGCCTTCGGA
CGTGAAGCCA GGAAGGCCGT AGAAAAAGCA CGTCAACAGG TGGCAACAGC CATTGGAGCA
TCCAGTGTGG GCGAAATCAG CTTCACTAGC TGTGGCACAG AATCTGATAA TATGGCCATT
CGTGGTGTAG CCTATGCAAA TCGTCAAAAG GGTAACCATA TTATTACCAC TGCTGCAGAA
CATAGTGCTG TCTTAGCCTG CTGTAAACAA TTGGAGAGAG AAGGCTTTTC TGTAACTGTT
TTACCTTTGG ATGAATACGG CAGAGTAACT GCACAGCAGG TTGCTGATGC TATTACTGAT
AAAACGATTT TAATTTCTGT TATGCATGCT AATAATGAAA TTGGTACCAT TATGCCCATT
AGGGAAATCA GTGAAGTTGC TAGGGCCAAA AGGATTCTTT TCCATACAGA CGCGGTACAA
AGTGTTGGCA AAATTCCTGT AAATGTAGAT GAACTGGGAG TGGATTTGCT GACCTTGTCT
GGACATAAAA TATATGGTCC TAAGGGTATT GGGGCCATGT ACATTCGTAA AGGTACTTTC
TGGCAACCCA TTACCTTTGG TGGTGGACAG GAACGCCGGC GGCGTCCAGG GACTGAAAAT
GTGGCAGGTA TTGTTGGCCT GGGCAAAGCC ATCGAAATGG CAACAGAAAA TATGTATGCT
GATGCTGAAA GACTGTCCAA ATATAGAGAT CGCATTATCA CAGAGGTTCT TGAAAAAATC
CCTAATACCA TCTTGACTGG TCACCCTCAG GAACGCCTGC CAAACCATGT AAGCTTCTGC
TTCCGGTTTA TTGAAGGCGA ATCCATGCTT CTTATGTTGG ATATGAAGGG TATTGCCATT
TCCAGTGGTT CTGCCTGTAC TTCCGGTTCG CTGGAACCTT CCCACGTGTT GACAGCTATT
GGCCTATCTA AGGAAGTGGC CCACGGATCC CTGCGCTTGA CCATGGGTAA AATCAATACT
GAGGAGGATG TAGAATACTT CCTGGAGGTA CTGCCCCCCA TTATTGAGAG ATTAAGAGAA
ATGTCCCCAC TCAGTGAAGG ATGCAATCCC TGTGCTTGCA GTTCTTGTAC TGTTCATGAC
GATGATCACC ACCATGATCA TGGGGAATTT GAAGACGAGT TTTAA
|
|---|
| Protein sequence | MRKVYFDHSA TTPVDPAVVE EMMKYLTEHF GNPSSIHAFG REARKAVEKA RQQVATAIGA
SSVGEISFTS CGTESDNMAI RGVAYANRQK GNHIITTAAE HSAVLACCKQ LEREGFSVTV
LPLDEYGRVT AQQVADAITD KTILISVMHA NNEIGTIMPI REISEVARAK RILFHTDAVQ
SVGKIPVNVD ELGVDLLTLS GHKIYGPKGI GAMYIRKGTF WQPITFGGGQ ERRRRPGTEN
VAGIVGLGKA IEMATENMYA DAERLSKYRD RIITEVLEKI PNTILTGHPQ ERLPNHVSFC
FRFIEGESML LMLDMKGIAI SSGSACTSGS LEPSHVLTAI GLSKEVAHGS LRLTMGKINT
EEDVEYFLEV LPPIIERLRE MSPLSEGCNP CACSSCTVHD DDHHHDHGEF EDEF
|
|---|
| |