Gene Dred_0720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0720 
Symbol 
ID4957262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp774052 
End bp775146 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content44% 
IMG OID640179894 
Productglycine cleavage system T protein 
Protein accessionYP_001112084 
Protein GI134298588 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0404] Glycine cleavage system T protein (aminomethyltransferase) 
TIGRFAM ID[TIGR00528] glycine cleavage system T protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGAAC TAAAACGTAC ACCTTTGTAC AACATCCATC TGGCAGCTGG AGCTAAGATG 
GTGGAATTTG GCGGTTGGTT GATGCCAGTA CAGTATGAAG GAATTATTGC CGAACATCAG
GCTGTGCGGT CCGCTGCGGG GTTATTTGAT GTATCCCACA TGGGTGAAAT ACAAATCTCT
GGCCCAACTG CCAGGGAGTT TGTTCAAAGG CTGGTAACCA ACGATATATC CAGATTAAAA
CCGGGGTGTG CAATTTATTC CCCCATGTGT AATCCCCAGG GAGGTACCGT TGATGATTTA
TTAGTATATC AACTGGAAGA TCAACAATAC TTGTTGGTAG TTAATGCCTC TAATACAGAT
AAGGATTTTC ATTGGATTGT CAGTCAGCAG GTACCAGGTG TAGAGATACA AAATGTTTCA
GAGGTAACTT GTCAATTGGC ACTACAAGGG CCACAGGCAG AAAAAATTTT ACAGAGGTTG
ACTGCAGTGG ACCTAAGCCA TATAAAATCC TTTTGCTTTG TCTATGGAGC CGTTGAGGGT
ATTCACTGTC TGATTTCCCG TACCGGTTAT ACTGGCGAAG CAGGTTTTGA ACTATATTTT
CCGGCGTCCC ATGCGGAAAG GGTTTGGCAG GCGATTATGG CAACCGGAGC CACAGATGGC
CTAAGACCTG TGGGCCTTGG AGCCAGAGAT ACTTTGCGCT TTGAAGCTTG CCTGGCACTC
TATGGTCATG AATTAACCGA TGATATTTCT CCACTGATGG CCGGATTGGG CTGGACGGTA
AAATTTAATA AACCGGAATT TGTAGGGAAA GAACCTTTGC TGAAACAGAA GGAAGCAGGA
ACTACCTATC AGTTAGTGGG ACTAGAGATG ATTGACCGGG GCATTCCTCG TCAGGGATAC
GCTATTTTTA AAGAAGGTCA AGAAGTAGGG TGGATTACCT CTGGAACCTT TGCACCAACC
CTGGGAAAAA ATATGGGATT GGGTTATGTT GAAATACCAT TTGCAGATGT AGGCAAAGAA
TTGAATATTA TGGTTCGTAA CAAGCCATTA AAGGCACGCA TTGTGAAAAA ACCATTTTAT
AAGCGGGAGG TTTAG
 
Protein sequence
MQELKRTPLY NIHLAAGAKM VEFGGWLMPV QYEGIIAEHQ AVRSAAGLFD VSHMGEIQIS 
GPTAREFVQR LVTNDISRLK PGCAIYSPMC NPQGGTVDDL LVYQLEDQQY LLVVNASNTD
KDFHWIVSQQ VPGVEIQNVS EVTCQLALQG PQAEKILQRL TAVDLSHIKS FCFVYGAVEG
IHCLISRTGY TGEAGFELYF PASHAERVWQ AIMATGATDG LRPVGLGARD TLRFEACLAL
YGHELTDDIS PLMAGLGWTV KFNKPEFVGK EPLLKQKEAG TTYQLVGLEM IDRGIPRQGY
AIFKEGQEVG WITSGTFAPT LGKNMGLGYV EIPFADVGKE LNIMVRNKPL KARIVKKPFY
KREV