| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1644 |
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| Symbol | |
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| ID | 4928954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | - |
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| Start bp | 1581383 |
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| End bp | 1581940 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640167150 |
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| Product | transcription initiation factor E subunit alpha |
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| Protein accession | YP_001098155 |
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| Protein GI | 134046670 |
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| COG category | [K] Transcription |
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| COG ID | [COG1675] Transcription initiation factor IIE, alpha subunit |
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| TIGRFAM ID | [TIGR00373] conserved hypothetical protein TIGR00373 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.275573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTAT CAAAAGATGA GATATTTACA ATGCTCGAAA ACCCACTAAT ACAACAGGTA
CTTTTCGAAA TAATGGATGA AGATGTTGTT GGTTTTGACG TGTTGTCAGT ATTAATCAAT
ACTAATGAAG TAACTGATGA TGAAATTTCA AGACAGTTAG ACGTAAAATT AAACAACATT
AGAAGAATAC TTTACAAATT ATATGAGGCA AGGCTTGTAG ATTACAATAG GGAAAAAGAT
GAAGAGACAA ACTGGTATAC ATACACATGG AAACCATCCC TCGAAAAAGT TCCTGCATTA
GTTGCTAAAA AGATGAAAAA CGTACTCAAT GGTTTAAAAG AACAGCTTGA AATGGAAGAG
ACAAACATGT TTTTCTTCTG TTCTGATTGT GAGATTAAAT TTACATTTGA AGATGCAATG
GACAGTGGAT TTAGATGCCC ACAATGTGGT GGAATGATGT ACGAGTATGA TAATAAAAAA
GATATTTCAC TATTAAAAGA GCAAATTAAT TATTTAGAGG ACGAATTTAC TAAAAATCCT
CTCTTTTCTG CATATTAA
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| Protein sequence | MNLSKDEIFT MLENPLIQQV LFEIMDEDVV GFDVLSVLIN TNEVTDDEIS RQLDVKLNNI
RRILYKLYEA RLVDYNREKD EETNWYTYTW KPSLEKVPAL VAKKMKNVLN GLKEQLEMEE
TNMFFFCSDC EIKFTFEDAM DSGFRCPQCG GMMYEYDNKK DISLLKEQIN YLEDEFTKNP
LFSAY
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