Gene MmarC5_1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_1560 
Symbol 
ID4929137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand+ 
Start bp1505369 
End bp1505986 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content33% 
IMG OID640167056 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001098071 
Protein GI134046586 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATCTATA AATTAAATGG AAGAGGTTAT GATTCAAATT CGTACCTGAT AGTGGATAAA 
AAAGTTATTT TAGTAGATCC TGGAACTCCT GGGACTTTTG AACATTTAAA AAAGGATGTT 
TTAAAGTATA CTGACAAAAT AGATTATATT ATAAACACCC ACTGCCATTT TGACCATGTT 
GGAAGCGATT ATCTGTTTCA GGAAGAATTT AACGCTCCTG TTTTAATCCA TGAATCAGAA 
TTACAAGACC TTGCACAGAA TAGTGATGTA ACAGTTAGTC GGCTTTTTGG AGTAAATTTA 
ACCCCTCCAA AAGATATTTT TACAATTGGC GAAGTCGAAT CAGAATTAAA AGAAATTGGA 
ATTGAAATTA TACATACTCC GGGGCATACC GCTGGAGGAA TAAGTATTTT GTATAAAGAT 
TCGTTAATTA CCGGAGATAC ACTATTTGCG TACGGTGTTG GACGTAGTGA TCTTCCAACA 
GGAAACTTAA TAAATTTACG AGAATCCATA AATTTGCTCG AAAAAATAGC TTATAAAAAA 
GGGGTTTTAA AAATATACTC CGGACACGGA GAAGCTGGCG ATTTGAGCGC GTTTTCAAAT 
GCAATGTTAT TTATATAA
 
Protein sequence
MIYKLNGRGY DSNSYLIVDK KVILVDPGTP GTFEHLKKDV LKYTDKIDYI INTHCHFDHV 
GSDYLFQEEF NAPVLIHESE LQDLAQNSDV TVSRLFGVNL TPPKDIFTIG EVESELKEIG 
IEIIHTPGHT AGGISILYKD SLITGDTLFA YGVGRSDLPT GNLINLRESI NLLEKIAYKK 
GVLKIYSGHG EAGDLSAFSN AMLFI