Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0006 |
Symbol | |
ID | 4928413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | + |
Start bp | 3841 |
End bp | 4596 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640165501 |
Product | TatD family hydrolase |
Protein accession | YP_001096538 |
Protein GI | 134045052 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.637647 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAG ATGATTTTAA GTATATCGAT TCCCACTGCC ACGTTGAAGA TAAGTCACTC AATAAATTTC GTGAAGATAT TGTAAAAAGG GCGTTTGACG AAAAAGTGCA GATGGTAACG AGCGGTACGA ATTTAGGTGG CTGCAGAAGA GCAGTTGAAT TAAAAGATAA ATATGGAATT TACATAACTC TTGGTTATCA CCCGGGAAGA GTAAATGCCG AAGATAACGC AATTGATAAA GTTTATAGAT TTATTCAATC AAAAGAAAAG GATATTTTGG CAGTTGGGGA AATCGGGCTT GATTTTGATG CAGGAAATAC TGAAAGACAG GAAAGTATAT TTAAAAAGTT TATAAAACTC GCAGAAGAAT TAAATAAACC TGTAGTAATT CATGCAAGGG GTATGGAAGA GCGTTCCTAC GAAATTTTAA GAAATGATTC AGTTTCAATG TACCACTGTT ACAGCGGTTC ACTGGAACTT GCAAAAGGGC TGATCGAAAA CGGCAATTTT ATTTCATATT CTACATTAGT ATGCTTTTCA GATCATCATA AAAATCTTGT TAAAAATCTC AGTCTTGAAA ATATTGTGGT GGAAACAGAT AGTCCTTATA TTTCACCGAT AAAAGGTGAA AAAAATGAAC CAAGAAATGT AATAAAGGTC ATTGAAACGA TATGGGAATT AAAAAAGGAC GAATATTCCT TAGACGAAAT CACTAAAATT ATATACAATA ACACAAAGAG GTTATACCAT ATCTGA
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Protein sequence | MNLDDFKYID SHCHVEDKSL NKFREDIVKR AFDEKVQMVT SGTNLGGCRR AVELKDKYGI YITLGYHPGR VNAEDNAIDK VYRFIQSKEK DILAVGEIGL DFDAGNTERQ ESIFKKFIKL AEELNKPVVI HARGMEERSY EILRNDSVSM YHCYSGSLEL AKGLIENGNF ISYSTLVCFS DHHKNLVKNL SLENIVVETD SPYISPIKGE KNEPRNVIKV IETIWELKKD EYSLDEITKI IYNNTKRLYH I
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