| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3387 |
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| Symbol | |
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| ID | 4923927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4036861 |
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| End bp | 4037787 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640164999 |
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| Product | band 7 protein |
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| Protein accession | YP_001095512 |
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| Protein GI | 127514315 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000435032 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGAAT TTACCATTTT TATACTCTTC GTTTTCTTTA TTCTTTATAA CCTATTGTTG
ATCGTTCCCA TGCGCGAGGT ACACGTTATC GAGCGTCTGG GTAAGTTTAG GGTGGTGTTA
CAGCCAGGTT TTCACTTTTT AATTCCCTTC TTCGACCGCG TAGCCTATCG CCACGACACC
CGTGAGCAGG TGCTGGATGT GCCGCCACAG AGCTGTATCT CGAAGGATAA CACTCAGCTG
GAGGTCGACG GCCTGGTCTA CCTCAAGGTG ATGGACGGTA AACTGGCCAG CTATGGTATC
GAAGACTATC GCCGCGCGGC GGTGAATCTG GCACAGACCA CAATGCGCTC CGAGATAGGT
AAGCTGAGTC TGAGTGAGAC CTTCTCCGAG CGAGACAGCC TCAACGAATC TATCGTACGG
GAGATCGATA AGGCGTCCGA TCCCTGGGGG ATCAAGGTAC TCAGGTACGA GATCAAAAAC
ATTACGCCAT CTTTCAAGGT GATCCACACC CTGGAGAAGC AGATGGAGGC CGAACGCAGT
AAGCGCGCCG AGATCACCCT GGCCAATGCC GAGAAGGCGG CGATGATTAA CCTCTCAGAG
GGTGAGCGTC AGGAGGCGAT CAACCTGTCG GAGGGTGAGA AGCAGAAGCG GATCAACGAG
GCCAAGGGTA CGGCCCAGGA GATTGCCATC GTTGCCCGCG CCAAGGCGGA AGCCATGACC
ATGGTCTCAG AGGCCTTGGC ACTGGAAGGC GGTAACGAGG CGATGAACAT GCAGCTCAAG
GAGCAGTTCA TCACCCAGCT GGGTAAGATT CTCAACGAAG CGGATATTTC AGTGGTGCCG
GCCGAGATGG CCAAGCTGGA AGGCTTCTTT GAGGGCATGG AGCAGGTGAC TCAGAGTGTG
GGTCAGGTAA AAGGAGGTCG CGCATGA
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| Protein sequence | MFEFTIFILF VFFILYNLLL IVPMREVHVI ERLGKFRVVL QPGFHFLIPF FDRVAYRHDT
REQVLDVPPQ SCISKDNTQL EVDGLVYLKV MDGKLASYGI EDYRRAAVNL AQTTMRSEIG
KLSLSETFSE RDSLNESIVR EIDKASDPWG IKVLRYEIKN ITPSFKVIHT LEKQMEAERS
KRAEITLANA EKAAMINLSE GERQEAINLS EGEKQKRINE AKGTAQEIAI VARAKAEAMT
MVSEALALEG GNEAMNMQLK EQFITQLGKI LNEADISVVP AEMAKLEGFF EGMEQVTQSV
GQVKGGRA
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