Gene Shew_2279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2279 
Symbol 
ID4922301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2662064 
End bp2662444 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content56% 
IMG OID640163864 
Producttetraheme cytochrome c 
Protein accessionYP_001094404 
Protein GI127513207 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0855381 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAGAG TATTATCGGC CCTCTGTTTG GCGGCGCTAC TGAGCGCGCC GGGTGCACAG 
GCCATGAAGC TGAAAGATTA TCATAAAGAG ATCATGACCA ACGAGCAGGG CAAGGTGGAG
TGCAGCGCCT GTCATGGCGA GGCGAAACGC AAGAGCATAC CTAAGATGAG TGCCTGCGAG
TCTTGCCACG GCACGGCGGC CGAGATGGCC GAGCTTACCA AGCGCCCCGA GGGGGCAGGC
CACAGCGTAG AGCCGAATCC CCACGACAGC CTGCACTATG GCAGCGATCT TCCTTGTACC
TACTGTCATC AGGAGCACAA GGAGAGCAAG GTGTACTGTA ACCAGTGTCA TGAGTTTAAG
TACCCTAAGA TGAAACGTTA G
 
Protein sequence
MLRVLSALCL AALLSAPGAQ AMKLKDYHKE IMTNEQGKVE CSACHGEAKR KSIPKMSACE 
SCHGTAAEMA ELTKRPEGAG HSVEPNPHDS LHYGSDLPCT YCHQEHKESK VYCNQCHEFK
YPKMKR