| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1759 |
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| Symbol | |
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| ID | 4921858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2009317 |
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| End bp | 2010150 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640163320 |
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| Product | hydrogenase accessory protein HypB |
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| Protein accession | YP_001093884 |
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| Protein GI | 127512687 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTAAAG ACTGCGGCTG CTCTATCACT CGGGATCACC ACCACCATGA TCACGACCAT
CACCACAGCC ATGAGCATGA TAATCATCAC GAACACAGCC ATGAGCATAG CCACGCGCAC
GGTCATGAGC ACAGCCACGG GCATCATCAC GACCACGGCA CCCTGCGTAG CAATCCCCAG
CTCAACGACA AGAAGACACT GTCTGTCATC CATAAGATCC TCGACAAGAA CGATCACGAA
GCGGCCCACA ACCGTGCCCA CTTCGAGGCC CACAATATCA CCGCCTTCAA CCTGATGAGC
AGCCCAGGCA GCGGCAAGAC CACACTGCTC GAGCACCTCA AGGAGTACAC AGACCTCAAC
TATGGCGTGG TCGAAGGCGA TCTTGAGACC TCCCGCGACG CCGACCGCCT TACCGCCAAG
GGCATTCCCG CCTTCCAGAT CCAGACCGGC TCCGCCTGTC ACCTGGACGC CTTCATGGTG
CACGATGCCC TGCATCATGT TGATCTGGCG GCCCTGGATA TCTGCTTCGT GGAGAACGTC
GGCAATCTGG TCTGCCCCGC CTCCTACGAC GTGGGCACCC ACTTCAACAT AGTGCTGGTG
TCTGTACCCG AAGGCGATGA CAAGATAGAG AAATACCCTG TGATGTTCCG CAAGGCAGAT
CTGGTGTTGA TCACCAAGGC CGACCTGCTG CCCCACTTCG ATTTCAGCGT CGAGGAAGCC
AAGGCCCAGG TGAAACGCCT CAACCCGGAT GCCGAAGTGA TCACCACCTC CATTAAGGAT
GGCGACAGCA TGCGCGCCGT GGTCGACTGG CTAAACGCCC ACAGGAGCCA ATAA
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| Protein sequence | MCKDCGCSIT RDHHHHDHDH HHSHEHDNHH EHSHEHSHAH GHEHSHGHHH DHGTLRSNPQ
LNDKKTLSVI HKILDKNDHE AAHNRAHFEA HNITAFNLMS SPGSGKTTLL EHLKEYTDLN
YGVVEGDLET SRDADRLTAK GIPAFQIQTG SACHLDAFMV HDALHHVDLA ALDICFVENV
GNLVCPASYD VGTHFNIVLV SVPEGDDKIE KYPVMFRKAD LVLITKADLL PHFDFSVEEA
KAQVKRLNPD AEVITTSIKD GDSMRAVVDW LNAHRSQ
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