| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1259 |
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| Symbol | |
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| ID | 4920561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1455068 |
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| End bp | 1455226 |
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| Gene Length | 159 bp |
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| Protein Length | 52 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640162799 |
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| Product | phage transcriptional regulator, AlpA |
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| Protein accession | YP_001093388 |
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| Protein GI | 127512191 |
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| COG category | [K] Transcription |
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| COG ID | [COG3311] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.477494 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGGCAG GCTACTTCCC CAAGTCAGTG AAGCTAGGTC CCCGGCTGGT GGCCTGGGTT
GAAGAGGAAG TCGAGCAATG GATTGCTGAT AAAATCAGCA AGCGAGACGT GGGTAGTGAC
CAAATAGTCA AATCTGCTTC TGGAGTGGAT AAGGCTTAA
|
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| Protein sequence | MAAGYFPKSV KLGPRLVAWV EEEVEQWIAD KISKRDVGSD QIVKSASGVD KA
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