| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1200 |
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| Symbol | |
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| ID | 4922232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1390960 |
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| End bp | 1393761 |
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| Gene Length | 2802 bp |
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| Protein Length | 933 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640162734 |
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| Product | hybrid sensory histidine kinase BarA |
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| Protein accession | YP_001093329 |
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| Protein GI | 127512132 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.930165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGTG CAGACAATAT GACTAAATAC AGCCTGAGAG CCTGGGTTCT CGTGCTGGCC
TTAGCGCCCA CTATTTTGGT TGGTATTTTA CTTGGCAGCT ATTTTACCAT AAATCGTTTC
TATGAGCTGG AAGAAAGCTT AATCGAACGA GGCGGCAATA TCATCGAGCC GCTGGCCATC
TCCGCCGAGA TAGGCCTGGA AACCAAAAAC TTCGAGACCA CCAAACGCCT GATCACCTCG
GTGCAGCTCA ATAAGTCCAA CCTGGTGCAG TTTATTGCCA TCTTCGACAC CAACAACCGG
GTGATAGTGA CCTCACATCA CTATAAGAGC CACGAGTTTA TGCGCTATAA CGAGCCCATC
GACTCGCTGC AGAACACAGA GGTGGAGCAG TTTGGCGACA GCATCATCAT GCGCAGCCCC
ATCTTCTCCA GTCAGCGCGA ACTTGTGGTC AGCCCCTACG ACAGCAACTC CATGGCCCAG
CAGGTCAACT CCGCCAAGCT CGGCTATATC GCCGTGCTGC TCAACAAGGA GAACGCCCTG
CTTGAGCAGC ACAGGGCCGC GGTGGCCGCC TTCATTATTG TCCTGATCGG GGTGCAGCTG
AACCTACTGT TTACCTTCCG CCTAGTGAAA AACGTCACCC ACCCCATCAC AGAGATGGTG
CGCGTGGTAG CCAAGATCCG CGAAGGCAAG CTGGACACCC GGGTCGACGG TAACCTGATT
GGTGAGCTAG ACCTGCTCAA GCGAGGTATC AACGCCATGG CGGGCTCCTT GTCGGAATAC
CATGAGGAGA TGCAGCAGAA TATCGATCAG GCCACCTCAG ATCTGCGCGA GACCCTGGAG
CAGATCGAGA TCCAAAACGT CGAGCTGGAT CTCGCCAAGA AGCGCGCCCT AGAGGCCAGC
CGCATCAAGT CAGAGTTCTT GGCCAACATG TCCCACGAGC TGCGCACGCC GCTCAACGGG
GTGATCGGCT TCGCCAAACA GCTATTGAAG ACGCCGCTAC ACGCCAGTCA GCAGGACTAC
ATCAAGACTA TCGAGAAGAG CGCCACCAAC CTCTTGGGGA TCATCAACGA CATCCTCGAC
TTCTCTAAGC TGGAGGCGGG CAAGATGGAG CTGGAGAACA TGCCCTTTGC CCTGCGTGAG
GTGATTGACG ACACCATCTC TCTGCTGGCC AACAGCGCCA AGGAGAAAGA TCTCGAGCTG
GTGGTAGATA TCGAGCCTAG CATCAACGAC AACGTCTCAG GCGATGCCCT GCGGGTCAGC
CAGGTGATCA CAAACCTTGT GGGCAACGCC ATCAAGTTTA CCGACAGCGG CAGCGTGCAC
CTCAAGATGC GCCTGACCAG CGAAGAGGCC GAGAAGGTCA ACGTGCGCTG CGAGATCACC
GACACAGGCA TAGGCATAGA CAAGCCCCAC CAGGCTCAGC TGTTCCAGGC CTTCGGCCAG
GCAGACTCCT CTATCTCGCG TCGCTTCGGC GGCACTGGCC TCGGGCTTAT CATCACCAAG
CGTCTGATCA ACCGCATGGG CGGCCAGATT GGCTGTATCT CGGCGCCGGG TAAAGGCTCG
ACCTTCTGGT TCACCCTGCC CCTCAAGCTG AGTCCCTACC CCATCAGCCA GCCGCTGGAA
ACCGACAACC TCATCGACAA GACGGTGCTC TTGTTCGAGC CGCGGGAGCT ATCACGCAAG
GTCCATGAAA GCCTGCTTAG CCACTGGGGC ATGCAAAATA TCAGTATAAC CACTGCCGAA
GATCTGGCCC GGGTGGCCGG CGAAGAAGGC CGCCACTTCG ACTACGCCAT CATCAGCTGC
AACGATTTGG CCAGCAGTCC TAACCTGTTA AACGTGCTCA ATAAGATAGC CAAGATCAGC
GACTACACCC TTTACCTCTG TAGCAGCACA GACAGCGCCG CCAAGATGAG CCTGATCCAG
CCCAACGTGG ACAAGGTGAT GCAGGCGCCG GTGGGCGAGC GCGCCCTGGC CGTGACCCTG
ATTAATCCCC ACCGCGCCCA ATATGAGGCC ATGCCTTTCC AGGAAGCGGT CAAAGAAACC
CAGGAGCGCG AACCCATGAG CGTGCTGGCG GTGGACGATA ACCCCGCCAA CCTCAAGCTG
ATTAAGACGC TGCTCAAGGA GCTGGTTACT CAGGTGACGG TCACAGACAA CGGCCAGGAG
GCGGTAGAGA TCGCCAAGGC CAAGAGCTTC GATCTCATCT TCATGGATAT TCAGATGCCG
GGCACCGACG GCTTTAGCGC CACCAAGCAG ATACGTGAGC ATTCACTCAA TCGCAATACG
CCGATTGTCG CCGTGACCGC CCACGCCATC GCCGAGGAGC GCGAGCGCAT CGATCAGAGC
GGCATGGATG GTTACCTGCC CAAGCCAATC GATGAGGCGG CGCTGAAGAG TGTGATCAGC
CGCTGGAAGA CCCGGCCGCA GTTTACCCAT TTCGACCAGC ACACCCTCAA TTGGGATCTC
TGCCTGACCC AAGCCAACCA GAAAACCAGT CTGGCGCTGG AGATGCTGCA GATGCTGGTC
GACTCCCTGC CCGAGACCCG TGAGCACATC TCGGGCGCCC TCGAGCGTCA GGACAGCCAG
GCCATGGTCA GTCATGTGCA CAAGCTCCAC GGCGCCAGCT GCTACTGCGG CGTGCCGACC
ACTCAGCGAC TCTGTCGAGA GATTGAACAG TCACTCAAGC AAAATGCCAG TGTCGATCTG
GTCGAGCCGG AAATACTTGA GTTACTTGAC GAGCTTTCTA AGGTAGAATC GGCCGCAAAT
CAAGTAATAG CCCAGTTATC TATGGATGTG ATCGATGAGT AA
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| Protein sequence | MNSADNMTKY SLRAWVLVLA LAPTILVGIL LGSYFTINRF YELEESLIER GGNIIEPLAI
SAEIGLETKN FETTKRLITS VQLNKSNLVQ FIAIFDTNNR VIVTSHHYKS HEFMRYNEPI
DSLQNTEVEQ FGDSIIMRSP IFSSQRELVV SPYDSNSMAQ QVNSAKLGYI AVLLNKENAL
LEQHRAAVAA FIIVLIGVQL NLLFTFRLVK NVTHPITEMV RVVAKIREGK LDTRVDGNLI
GELDLLKRGI NAMAGSLSEY HEEMQQNIDQ ATSDLRETLE QIEIQNVELD LAKKRALEAS
RIKSEFLANM SHELRTPLNG VIGFAKQLLK TPLHASQQDY IKTIEKSATN LLGIINDILD
FSKLEAGKME LENMPFALRE VIDDTISLLA NSAKEKDLEL VVDIEPSIND NVSGDALRVS
QVITNLVGNA IKFTDSGSVH LKMRLTSEEA EKVNVRCEIT DTGIGIDKPH QAQLFQAFGQ
ADSSISRRFG GTGLGLIITK RLINRMGGQI GCISAPGKGS TFWFTLPLKL SPYPISQPLE
TDNLIDKTVL LFEPRELSRK VHESLLSHWG MQNISITTAE DLARVAGEEG RHFDYAIISC
NDLASSPNLL NVLNKIAKIS DYTLYLCSST DSAAKMSLIQ PNVDKVMQAP VGERALAVTL
INPHRAQYEA MPFQEAVKET QEREPMSVLA VDDNPANLKL IKTLLKELVT QVTVTDNGQE
AVEIAKAKSF DLIFMDIQMP GTDGFSATKQ IREHSLNRNT PIVAVTAHAI AEERERIDQS
GMDGYLPKPI DEAALKSVIS RWKTRPQFTH FDQHTLNWDL CLTQANQKTS LALEMLQMLV
DSLPETREHI SGALERQDSQ AMVSHVHKLH GASCYCGVPT TQRLCREIEQ SLKQNASVDL
VEPEILELLD ELSKVESAAN QVIAQLSMDV IDE
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