| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1119 |
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| Symbol | |
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| ID | 4921037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1294566 |
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| End bp | 1295822 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162652 |
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| Product | glucose/galactose transporter |
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| Protein accession | YP_001093249 |
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| Protein GI | 127512052 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000391013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATCG TTGCCGGACT CTTCTTTATT CTGGGTTTTG CGACCTGGCT AAATGGGTCC
TTGATGCCTT ACCTCAAGCA GATCCTGCAA CTCACCCCGC TTCAAGCCTC CCTCATTCTC
TTCTCCTTCT ATATCGCCGT GACCTTTACC GCATTGCCCT CGGCATGGGT GATCCGTAAG
GTGGGTTACA AGACAGGCAT GGCGATGGGC ATGGGGATCA TGATGATTGC CGGCCTGCTG
TTCATACCCG CGGCCAAGAC GCAGGTATTT GCGTTGTTTC TGTTTGCGCA GCTGGTGATG
GGCACGGGCC AGACCCTGCT ACAGACGGCA GTGAATCCCT ATGTGGTCAG AATTGGCCCC
GAGGAGTCGG CCGCCGCTCG CGTGAGTGTC ATGGGGATCC TCAACAAAGG CGCAGGGGTG
ATCGCGCCGC TGGTGTTTAC CGCCCTGATC CTCGACAGCT TTAAAGACAG AGTCGGCGTT
GAACTGACCC AGGCGCAGAT CGACGAGATG GCCAATGGCC TAGTGTTCCC ATATCTGGGC
ATGGCTATCT TTATCGGTGT GCTGGCGCTG TTGGTGAAGA AGTCGCCTCT GCCAGAGCTT
GAAAATGAAG ACGAGCAAGA GGAGGGCACC AAGGGCCATA CCCGCGAGGC GCTGTCTCAT
CCTAATCTGG CATTAGGGGT AGTAGCACTG TTTTTCTATG TGGCAGTAGA AGTGATCGCC
GGCGATACCA TAGGCACCTT CGCCCTCTCT CTCGGGGTCG AGAACTATGG CGTGATGACC
TCCTATACCA TGATCTGCAT GGTCATAGGT TATTCGCTGG GTATACTGAC CATTCCCCGC
TTCATCTCTC AGCCTAAGGC GCTGATGATC TCGGCGATAC TAGGCCTAAT GCTGACGCTG
GGGATCTTAT TTGGTGACAA CGAGTCCTAT GCTATCGCCA ACGCGTTGCT GGTTCCCTTC
GGCGGCGCCA TGTTGCCAGA TACCCTGTTG ATGATAGCCT TCCTGGGTCT GGCTAACGCC
ATCGTCTGGC CAGCAGTATG GCCGCTGGCG CTATCTGGCA TGGGCAAACT GACCAGCACA
GGCTCGGCGC TATTGGTGAT GGGCATTGCA GGTGGCGCAT TCGGTCCGCT GTTTTGGGGA
TTAACCAGCT CGGCAACCTC CCTCGGTCAG CAGGGCGGCT ATATGGTGAT GTTGCCTTGT
TACCTGTTTA TCCTCTTCTA TGCGGTGAAA GGCTATAAGA TGCGTAGCTG GAAATAG
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| Protein sequence | MAIVAGLFFI LGFATWLNGS LMPYLKQILQ LTPLQASLIL FSFYIAVTFT ALPSAWVIRK
VGYKTGMAMG MGIMMIAGLL FIPAAKTQVF ALFLFAQLVM GTGQTLLQTA VNPYVVRIGP
EESAAARVSV MGILNKGAGV IAPLVFTALI LDSFKDRVGV ELTQAQIDEM ANGLVFPYLG
MAIFIGVLAL LVKKSPLPEL ENEDEQEEGT KGHTREALSH PNLALGVVAL FFYVAVEVIA
GDTIGTFALS LGVENYGVMT SYTMICMVIG YSLGILTIPR FISQPKALMI SAILGLMLTL
GILFGDNESY AIANALLVPF GGAMLPDTLL MIAFLGLANA IVWPAVWPLA LSGMGKLTST
GSALLVMGIA GGAFGPLFWG LTSSATSLGQ QGGYMVMLPC YLFILFYAVK GYKMRSWK
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