| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0586 |
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| Symbol | |
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| ID | 4920568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 663695 |
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| End bp | 664474 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640162119 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001092717 |
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| Protein GI | 127511520 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0440919 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.522989 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAAAGC ATGTTTGGAA ATTGGCCGCA GGCCTACTGG CCCTGTTTGC CGTGCAGCAG
CCTGCCCTGG CATTTTCTGT GCCCGCTACC GAAGCGGCGG CGCCTGCCAG TAAGTTGGCC
CATATTCAGC TAAAAGCCAG CCAAGGCGAG TCTGAGGCGC AATTTCTTCT CGGTTTGATG
TATCTCTCCG GCCGTTTCGT TAGCCCGGAT CCTCAGTTGG GTGCCAACTG GGTCGAACGC
GCCGCCGAGA CCGGCCACAA GAAGGCGGCC CAGACCATAG CGGATCTGGC CTTCGACGGT
AAGATCATTC CTCGTGACTT GGCCCTGGCC GAACGTTGGT ATCTGAGCCT GGCGAGCGAG
CAGGACAAGT GGGCCCAATT CCGTTTAGGT TTCATCTATG CCGCCGGTGG TAATGGTGTG
GCGCGCAACT GTGGTAAGGC GGTCGATAAC TTCATGGCGG TGGGCGATGA GATCTCCCTG
GGCAACGTGG TGTGGATCCT CTCTACCTGT CCCGAGGCCA AGTATCGTGA CGGCGGTAAG
GCCCTGGCCA TTGGCAAGGG GCTGGTCGAG GCCAACAAGC AAGACCCGAC TAACTTGGAT
AATCTGGCGG CAGCCTATGC CGAGATTGGC GATTACAGCT CGGCGGTGGA TCTGCAGAAG
CAGGCGATCA AGGCGCTCAA ACAGACGGCC GAGTTCGATA AGTCAGATGA ATTTGAATTA
AGGCTGGAAA ACTATCGCCA GCAGAAGCCA TACCGTGAAG TGGTACCGCT GTCACAGTAG
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| Protein sequence | MTKHVWKLAA GLLALFAVQQ PALAFSVPAT EAAAPASKLA HIQLKASQGE SEAQFLLGLM
YLSGRFVSPD PQLGANWVER AAETGHKKAA QTIADLAFDG KIIPRDLALA ERWYLSLASE
QDKWAQFRLG FIYAAGGNGV ARNCGKAVDN FMAVGDEISL GNVVWILSTC PEAKYRDGGK
ALAIGKGLVE ANKQDPTNLD NLAAAYAEIG DYSSAVDLQK QAIKALKQTA EFDKSDEFEL
RLENYRQQKP YREVVPLSQ
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