Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0530 |
Symbol | |
ID | 4920742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 599363 |
End bp | 600490 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640162059 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001092661 |
Protein GI | 127511464 |
COG category | [R] General function prediction only |
COG ID | [COG0579] Predicted dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAAGC TTGATGCGAT CGTTATCGGT GCCGGTGTGG TTGGGCTCGC GGTGGCGGCT AGCTTGAGTC GGCGTTTTGG CAATGTGCTG ATCATAGATC GCGCCGAGAC CATAGGCACA GGCATCAGCA GTCGCAACAG CGAGGTGATC CACGCAGGGA TCTACTACCC GACGGGGAGC CTCAAGGCGC AGCTTTGCGT AGAGGGTAAA CGGCAGCTGT ATGCCTATTG TCGTCGCCGG GGTGTCGCCG TGAATTCCCT GGGTAAGCTG ATAGTGGCGA CTCAGGTCGA GCAGGAGGCG CAGCTCGACG CCTTGTTCAC TCAAGCTCGG GCCAATGGGG TCGATGATCT TAACCCCCTT GGTCGCCGGC AACTGCAGGC ACTCGAGCCG GCGCTCAAGG CATCTGCCGG GTTACTCTCT CCCTCTACAG GTATTGTCGA CAGTCATGGC TTGATGCTGA GTCTGCTGGC CGAGGCGGAG GAGTATGGCG CGATATTCTG CCCTCATACC GAGTTTATCA CCACCCAGGC CGATGCGAAT GGCTTCAGGG TGGAGCTGAT GCAGCAAGGG GAGCGGGTGA GTCTGGAGAC CAGCTTTCTG ATCAACTGCG CCGGATTATT TGCCACAGAG GTGGCGACGC GTATTGAGGG GCTGGCAGAG TCGCTCGTTC CACAGCTTTA TTGGTGCAAG GGGCATTACT TTGCCTATCA GGGCAAGAGT CCGTTTGCGC ATCTTATCTA TCCCGTGCCC GAGCCAGGGC TGAAAGGCTT AGGAATACAC GCCACCATAG ATCTCGGCGG CCAGCTTAAG TTTGGCCCGG ATGCTCAATA CATGGTACCT GACTCTCTGG AAGACTATCG GGTGCCAGAA GCGCTGCGCC AGCGTTTTCA TCAGGCGATC GCGAGCTATT ACCCAGGCAT AGCAATTGAG CGGCTACAGA CTGCCTACGC CGGGATCCGC CCTAAGCTAC AGGGGCCAGA TGACACCGAG GTGGCTGATT TCTTGATTCA GGGGGAGGCG CAGCATGGCA TACCAGGCTT GGTGAATCTG CTGGGAATCG AATCCCCCGG ATTAACGGCG AGTCTGGCCA TTGCCGAGCA GGTCTCTCGG CAGTTAGTGA CGCCATAA
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Protein sequence | MDKLDAIVIG AGVVGLAVAA SLSRRFGNVL IIDRAETIGT GISSRNSEVI HAGIYYPTGS LKAQLCVEGK RQLYAYCRRR GVAVNSLGKL IVATQVEQEA QLDALFTQAR ANGVDDLNPL GRRQLQALEP ALKASAGLLS PSTGIVDSHG LMLSLLAEAE EYGAIFCPHT EFITTQADAN GFRVELMQQG ERVSLETSFL INCAGLFATE VATRIEGLAE SLVPQLYWCK GHYFAYQGKS PFAHLIYPVP EPGLKGLGIH ATIDLGGQLK FGPDAQYMVP DSLEDYRVPE ALRQRFHQAI ASYYPGIAIE RLQTAYAGIR PKLQGPDDTE VADFLIQGEA QHGIPGLVNL LGIESPGLTA SLAIAEQVSR QLVTP
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