| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0082 |
|---|
| Symbol | |
|---|
| ID | 4920417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 95660 |
|---|
| End bp | 96109 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640161593 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001092213 |
|---|
| Protein GI | 127511016 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0448556 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAA CTCCATTGGC CGCCTTCATA CTGAGTTTCA TACTCCTGCT GAGCGGCTGC
GCCACCTCTT ACGACACAGA AAAATCCTTC TGGAGCTTCG GTGAAGGCTT CGACGTGGTA
CAGATAGCCG ACGATAGCTG GCAGATCAGC TTCGTCGGTA ACGACATGAC AGATCGCGCC
CTAGCCCGCA AATATGTTCT GCGCAAGTCC GCCGAGATAG TCCAGGCCCA TGGCTACCCC
TACTTTGCCC TAACCACAGA GCAGAACCAC CGCGACGCGG TCGGCAACGA CACCCTGGGT
TTTGGCCACA AGGACTGGGG CTATGGCCTG GGTAAGGTGG AAAATGAGAC CTCAGTGATC
GTCGAAGTTA CCGGCCTGCA GGATAAGGAA TCGATGCAGA CAACCAAGGT ATATGACGCC
GCCTACCTGA TCGATCACCT CACATGGTAG
|
|---|
| Protein sequence | MKTTPLAAFI LSFILLLSGC ATSYDTEKSF WSFGEGFDVV QIADDSWQIS FVGNDMTDRA
LARKYVLRKS AEIVQAHGYP YFALTTEQNH RDAVGNDTLG FGHKDWGYGL GKVENETSVI
VEVTGLQDKE SMQTTKVYDA AYLIDHLTW
|
|---|
| |