| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0030 |
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| Symbol | |
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| ID | 4920515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 32076 |
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| End bp | 32831 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640161542 |
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| Product | hypothetical protein |
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| Protein accession | YP_001092162 |
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| Protein GI | 127510965 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02001] conserved hypothetical protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00621032 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGATGA TGAAGACCTT AACCCAGTTA AAATGCTCGA TACTCCTTGG CAGCCTATTA
GCCGCAAGCG GCGTCATGGC CGAAGCGCAA GACACCCAAG TCTTAGGCGG CAATATCACA
GGCAAGCTGA CCTTTGCCTC AGATTATGTC TTTCGTGGTG AGTCAGAAAC CATGGATGGC
GATGTCCCTG TCGTGCAAGG CACGCTGGGA TGGGGAAATG TTCAAGGCTG GTACGGCGGT
GTGTATGCCT CCAACATCAA GTTTGCCGAT CCAAATCTTG AAATCGTCAC CGCACCCTAC
ATAGGTAAGG CGGGCACCTT CGGCGATTCT GGTATCACCT ATGATGTCAT GCTCTTCTCC
TATCTCTACC CGGGCGCCTC ATACTCTAAC TACACAGAGT TATGGCTCAA GGTGGGTAAG
CAGTTCGGCC GCACTAACCT ACAACTGGAA GTGACCCCGA CCGTCGATGA CTGGTTTGGT
GTCGATGGCT GGCAAGGCGT GAACTACGCC GTCCATCCAA GCTACCAGTT CGACAATGGC
ATTAACCTGT CTGCCAGCGT CGGCTATCAG GATCTGGACG GTAACGGCGC CGAAGGCTGG
GGTCACTGGA ACCTGGGTGT CAGCAAAACA TTCGCCGGCC TGAGTTTCGA TCTCAGATAC
CACGGCAGCA CAGTGGATGA GAGCCACAAG GTGTACGGTA CACAAACCAA GATTTTTGAT
GACCGAGTCG TTATCGGCGT CAGCAAGAGT TTCTAA
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| Protein sequence | MKMMKTLTQL KCSILLGSLL AASGVMAEAQ DTQVLGGNIT GKLTFASDYV FRGESETMDG
DVPVVQGTLG WGNVQGWYGG VYASNIKFAD PNLEIVTAPY IGKAGTFGDS GITYDVMLFS
YLYPGASYSN YTELWLKVGK QFGRTNLQLE VTPTVDDWFG VDGWQGVNYA VHPSYQFDNG
INLSASVGYQ DLDGNGAEGW GHWNLGVSKT FAGLSFDLRY HGSTVDESHK VYGTQTKIFD
DRVVIGVSKS F
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