| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1885 |
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| Symbol | |
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| ID | 4901204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 1840970 |
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| End bp | 1842418 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640135115 |
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| Product | type II/III secretion system protein |
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| Protein accession | YP_001066150 |
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| Protein GI | 126453026 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.181819 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGAGTG TGATCGACGC GATCGGCAAG CGGCGGCAAG CCGCATCGGC ATCGCCGCGC
GCGCGGGCGT TCGCGGCGGC GCGGCGCGCG GCCGCCGCGG CGTTGTGGTG GCTCGCGCTC
GCGCTGGGCA TGGCGGTGGC GCCGAGATTC GCCCGCGCGG CGGACCTCGG CCCGGTGCTG
GCCGTGCCCG CCGGCGGCGG CGAGATGGTG AAGCTGCCGG CGCCGGCGGT CGCGGTGTTC
GTCGCGGACC CGGACGTCGC CGACGTGCAC GTGCCGACGC CGCAGGCGGT GTTCGTGCTC
GGCAAGAAAG CCGGCACGAC GACGCTCTTC GCGCTCGGCG CGAACAACCG GACGATCCTG
CGCGAGACGG TCGTCGTCGA TGTCGATACG CCGTCGCTGC AGCGCATTCT CGATGCGCGC
TTTCCGCAAC TGCGCCTGAC GCTCGCGGGC GCGCCGGGCT CGCTGATGGT GAGCGGCCGG
GTGCCGAGCG CGGCGGACGC GGACGCCGTC GTGCAGACGC TCAAGCCGTA CCTGCGCCAG
CAGGAAGCGC TCGTCAACCG GCTCACGCTC GCGCGGCCGA TCCAGGTGCA CCTGCGCGTG
CGCATCACCG AGGTCGACCG CAACATCACG CAGCAGCTCG GCATCAACTG GAGCGCGCTC
GGCGCGAGCG GCAACTTCGT CGGCGGCCTG TTCAACGGGC GCACGCTGTT CGACACGGCG
TCGAAGGCGT TCGATCTGTC GCCGTCGGGC GCGTTCTCGG TGGTGGGCGG TTTTCACACG
TCGCGCTACT CGATCGACGG CGTGCTCGAC GCGCTCGATC AGGAAGGCCT CATCACGATG
CTCGCCGAGC CGAACCTGAC CGCGATCTCC GGCCAGACCG CGAGCTTCCT CGCGGGCGGC
GAGTTTCCGA TTCCGGTCGC GCAGGACACG ACGGGCGCGA TCACGATCCA GTTCAAGCCA
TATGGCGTGT CGCTCGACTT CACGCCGACC GTGCTCGCCG ACAACCGGAT CAGCCTCAAG
GTGCGCCCGG AGGTGAGCGA GATCGATCCG ACCAACAGCG TGACGACGGG CAGCATCAAG
GTGCCGGCGC TGACGGTGCG CCGCGTCGAC ACGACGGTCG AGCTGTCGAG CGGGCAGAGC
TTCGCGATCG GCGGGCTCCT GCAGAGCAAG AGCAGCGACG TGCTCGCCGA GCTGCCGGGC
CTCGCGCGGC TGCCCGTGCT CGGCAAGCTG TTCTCGTCGC GCAACTACCT GAACGACAAG
ACCGAGGTCG TCGTGATCGT CACGCCCTAC ATCGTGCAGC CGGCGAACCC GGGCGAGCTG
CGCGACGCGC TCGACGACGT CACGCGCCCG AGCAGCGACA TCGAGTTCGT GCTGCAGCGC
TCGCTCGGCA TCGATCCGCT CGGCGGCGAT GCGCCGCGGC TCGCGGGCCC GGCGGGGTTC
GTCTACTGA
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| Protein sequence | MWSVIDAIGK RRQAASASPR ARAFAAARRA AAAALWWLAL ALGMAVAPRF ARAADLGPVL
AVPAGGGEMV KLPAPAVAVF VADPDVADVH VPTPQAVFVL GKKAGTTTLF ALGANNRTIL
RETVVVDVDT PSLQRILDAR FPQLRLTLAG APGSLMVSGR VPSAADADAV VQTLKPYLRQ
QEALVNRLTL ARPIQVHLRV RITEVDRNIT QQLGINWSAL GASGNFVGGL FNGRTLFDTA
SKAFDLSPSG AFSVVGGFHT SRYSIDGVLD ALDQEGLITM LAEPNLTAIS GQTASFLAGG
EFPIPVAQDT TGAITIQFKP YGVSLDFTPT VLADNRISLK VRPEVSEIDP TNSVTTGSIK
VPALTVRRVD TTVELSSGQS FAIGGLLQSK SSDVLAELPG LARLPVLGKL FSSRNYLNDK
TEVVVIVTPY IVQPANPGEL RDALDDVTRP SSDIEFVLQR SLGIDPLGGD APRLAGPAGF
VY
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