| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_2151 |
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| Symbol | |
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| ID | 4908537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1988389 |
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| End bp | 1989873 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640125905 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001057032 |
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| Protein GI | 126460754 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACT TCCGCGTCGA AAGTTGCAAA GGGACGGTTG TGGAGGAGTA TCAGTCGGAG
GGCGCTAGGA TTCAGATATT TGCCTCAGAA GACGGCTACT GTTACAATGT CTCCTACGCA
TTTCCCTACT CGGACAAAGT GGGTGAGTAT GCGTATAAGG TTGTGGAGTA CCTCACGGCT
CACCAGATAA TTAGGCCTAA TGTAAGTAGA GAGGAGTTGG GCAAACTCAT TGAAATGGCC
ATGGCCGACA TAGGCGTTCC CAAGCAGTTG CGTGCCGCAG TGAGGTACTA CGTCCAGCTG
GAGGCCGCCG ACTACTCGTA CCTCACCCCG ATACTGTACG ACGTGAGACT TGAAAACATA
AACATCAACG GTATAGACGC GCCGATATAC GTAGACCACA GAGACTACGG CTATAACATA
AGGACAAACG TCGTCCCAAC AAACAGGGAG ACTTTGATAA AGATTGTGGG GAGGGTATAC
GCCGAGACGG GGCGCCCGCT CAACGAGCAG TACCCCATCC AAGACACGTA CATACGCTTG
AGAAACGGCG CGCTGTTGCG CTTCGCCACT GCCATGTCTG GGAGAGTGGC TAGAAATGCG
CCGTATGTGT CAGTGCGTGT ACAGCCCCCA TTCCCCATAT CACCCACGGA GCTCATAAAG
AGGCGCACCA TATCCCCCCT GGCCATGGCC TACCTCTGGT ACCTCTTTGA ACACCACAAG
TCGGTCATGG TGATCGGCGG AACTGGCACA GGTAAGACCA CGCTCCTAAA CGCGCTCCTA
GTCCTTCTCC CGCACAAGCG CCTGGCCATC GCAGAGGAGA CACCTGAGAT TAGAGTGCCG
CCGAGTTTTA AAAACGTCGT AATGCTCTTC ACATCTCCCA TGTACGACTA CATGAAGAGC
CTGCCAGGCT CTGAGTCAGC CATATACTTA ATCGACCTAG TGAAGTACCT ACTGCGCGCC
AGGCCCGACA TAATTGTCAT AGGCGAGAGC CGCGGCCGTG AGATACATGA ATTAATCCAA
GGCGTATTGA CAGGCCACGG CGGCGCTACA ACGTTCCACG CGGAGGATCT CATGGAGGTC
TTTATGCGCC TCACGGGGGA GGCCATTGGA GTTTCGCCGG AACACCTCTC CGCCTTCCAC
GTGCTGGCGA CCATTAGGCG CTTCGACTTC GGCAGGCGCG TCACTGGGAT AACTGAGGTC
GTCTGGCTAA GGGCCTACCC TTACGCCACG CCGGGCAAGA TAAAAATAAA GGAGGAGGAA
TTCGGTCTCA TAAACGTGGG CTGGTACGAC CCCCGCACAG ACAGCGTCGA AGTAGACTTG
AGGAGGTCCT ACTGGTTGCA GAGGCTAGGC GGATATGAGG AAATTATGGA GAGGGCGAAG
CTTCTATCCT CCCTGGTGGA GAAGGGCGTC TTTGACGCAG AGAAGGTGGC CGAGGCTGTG
ATGGACTACT ACAGGCAGAA GCATGTTGCT CTACGGAAGG CCTAA
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| Protein sequence | MLDFRVESCK GTVVEEYQSE GARIQIFASE DGYCYNVSYA FPYSDKVGEY AYKVVEYLTA
HQIIRPNVSR EELGKLIEMA MADIGVPKQL RAAVRYYVQL EAADYSYLTP ILYDVRLENI
NINGIDAPIY VDHRDYGYNI RTNVVPTNRE TLIKIVGRVY AETGRPLNEQ YPIQDTYIRL
RNGALLRFAT AMSGRVARNA PYVSVRVQPP FPISPTELIK RRTISPLAMA YLWYLFEHHK
SVMVIGGTGT GKTTLLNALL VLLPHKRLAI AEETPEIRVP PSFKNVVMLF TSPMYDYMKS
LPGSESAIYL IDLVKYLLRA RPDIIVIGES RGREIHELIQ GVLTGHGGAT TFHAEDLMEV
FMRLTGEAIG VSPEHLSAFH VLATIRRFDF GRRVTGITEV VWLRAYPYAT PGKIKIKEEE
FGLINVGWYD PRTDSVEVDL RRSYWLQRLG GYEEIMERAK LLSSLVEKGV FDAEKVAEAV
MDYYRQKHVA LRKA
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