| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_2001 |
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| Symbol | |
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| ID | 4908627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1857040 |
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| End bp | 1858287 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640125753 |
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| Product | Fmu (Sun) domain-containing protein |
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| Protein accession | YP_001056882 |
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| Protein GI | 126460604 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTAAGT GGACTGCAGA GGAGCTGGTA TCCTTCGTGG CCAAGGTCTT GTACGAAGTT
GTTCAAAACG AGCTCACCCT GGACTACGCC TTTCAAAAAG TCAAGAGGCG TTGGAGGGCG
CTGGAGAGCT TCAAGGTCTT CTACGACGCC TCCTTTGACG CAGTTAGGCA CTATTACTTC
TTGAGGTTCG CCGCGTCGAA GCTCTTTGGC TCAAGCGGTG CGAAGGCCGC GGCAAAGGCG
TGGTTCTTGT ACAGGGCAGA CTCTCTGCTC TACAACAAAG AGCTAGTGGC CAGGTACAGG
AAGCGGCTGC TCAAGAGGGC CTTGGCCAAG CCGGAGGACG TGGAGAAGGC CCTCGAAGAG
CTGAGGGGCG ACCCAGCGCG CTACCTCTCG GTGAAGTACA GCTACCACCC GGCGATAGTG
GAGACGCTCC TCAGATACCT CCCCCTGGGC GAGGTGGAGA GGCTGTTGGA GGCGGGCAAC
ACCACGTGGA TGTGGCTGAG GATAAACACC TTCAAAGTGG ACGTGGACAA GGGACTTAAG
CTACTGGAGC AGGAGGCAGA GGTGGAACCC CACCCCCACA TACCCTTCAT GGTGCTTGTG
AAAAAGGCCA GCAAGCCCAT CCAGTACCTC TCAGCGGTTA AGACCTTCGC CGCGATCCCC
CAGGACCTCG CCTCAGTCTA CACAGTCCTC GCCCTTGACC CAAGGCCAGG GGACTCGGTG
CTCGACCTAG CGGCGGCGCC TGGGATGAAG ATAAGCCTAG CCACCCAAAT CGCCGAGGGG
AAGCTTAAGG TAGTTGCGGC AGACGTGTCC CGAAAGAGGG TGGCCAGAAT GAGGCACCTA
CTAAAGGCGC TAGGGGCCTA CCAGTACGTA GACGTGGTAC ACGCAGACTC TAGAAAGCTC
GCCGCCAGGC GGTTCGACAA GGCGCTTCTA GACGCGCCGT GCACCTCCAG CGGCGCCTTC
ACCAAAGACC CCGGCGTGAA GATATACCCA AGGGTAGAGA GGGCCCGCCA ATACTCCCAG
CTACAGCTCC AACTGCTCAC GCGCGCACTA CAGCTGGCAG AGGAGGTGGT ATACGCCGTC
TGCTCCATTC TGCCAGAGGA GGGGGAAGAG GTGGTGTCCA AGGCCGGCGC CAGAGCAGAG
AAGCCGCTGG CCGAGCTAGC CCCATCCTAC TGGGGGGACA TAGGCGGCAG AACCTTCCCC
CACATCCACA GAAGCGAGGC ATTCTTCATC TCGCGGCTCA GGCCGTGA
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| Protein sequence | MAKWTAEELV SFVAKVLYEV VQNELTLDYA FQKVKRRWRA LESFKVFYDA SFDAVRHYYF
LRFAASKLFG SSGAKAAAKA WFLYRADSLL YNKELVARYR KRLLKRALAK PEDVEKALEE
LRGDPARYLS VKYSYHPAIV ETLLRYLPLG EVERLLEAGN TTWMWLRINT FKVDVDKGLK
LLEQEAEVEP HPHIPFMVLV KKASKPIQYL SAVKTFAAIP QDLASVYTVL ALDPRPGDSV
LDLAAAPGMK ISLATQIAEG KLKVVAADVS RKRVARMRHL LKALGAYQYV DVVHADSRKL
AARRFDKALL DAPCTSSGAF TKDPGVKIYP RVERARQYSQ LQLQLLTRAL QLAEEVVYAV
CSILPEEGEE VVSKAGARAE KPLAELAPSY WGDIGGRTFP HIHRSEAFFI SRLRP
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