Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1929 |
Symbol | |
ID | 4908311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 1796959 |
End bp | 1797441 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640125680 |
Product | hypothetical protein |
Protein accession | YP_001056811 |
Protein GI | 126460533 |
COG category | [C] Energy production and conversion |
COG ID | [COG4314] Predicted lipoprotein involved in nitrous oxide reduction |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGGTA GTAGAGGAGT AAGTCGCCGG GCATTTCTCA TGGCACTCGG GGCCTCTCTT TTGGTGGCTG GGGGTGCGGC ATATTTGCTG ACAAGGCCTA GGCAGAGCGG TGTGCCAGAC GTGAGACTCG GCGTGGATAA ATGCGCCTAC TGTGGCATGG TTATTGTAGA TAGGAGGTTC GCCGCGGTCT ACAACGAGGA CGGAAAGTGG GTCTACTTCG ACGACGTGAT ATGCCTCCTC CTCTACCTAA AGGCTGTGGA CAAGCTAGGC GATGTGGGGA AGGCGTATGT CCACGACTAT TCCACAGGAA GACTTATAAG GGCGGGCGAG GCCTATTATG TTGTGAACAA GAGAATTCCC ACCCCCATGG GCTCTGGCAT CGCCGCCTTT GAGAATAGGG AGGAGGCCGC AAAGTTTGGG CAAGTGTATA CGATAGATGA GCTTGTGGGC AAGTTAGAGG AAATAGCGCC GTTGGGGACA TGA
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Protein sequence | MAGSRGVSRR AFLMALGASL LVAGGAAYLL TRPRQSGVPD VRLGVDKCAY CGMVIVDRRF AAVYNEDGKW VYFDDVICLL LYLKAVDKLG DVGKAYVHDY STGRLIRAGE AYYVVNKRIP TPMGSGIAAF ENREEAAKFG QVYTIDELVG KLEEIAPLGT
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