| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1781 |
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| Symbol | |
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| ID | 4909033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1651934 |
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| End bp | 1652761 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640125530 |
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| Product | endonuclease IV |
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| Protein accession | YP_001056664 |
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| Protein GI | 126460386 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0648] Endonuclease IV |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000000369589 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCGAAGG TGTGGTTAGG TCCAGCCGGC ATCCCACAGT ACGTGGTGAA GGCGAAGTCT
ACGCTGGACG CAGTCAGAGT GGTGAGAGAG CTGGGCTTAA ACGCCATGGA AGTGGAGTTC
GTGCAGGGTG TCCGCATGTC GCGCGAGCTC GCTAAACAGG TTGGCAAGGC CGCTCAGGAT
CACGGAGTAC TGTTGTCTGT CCACGCGCCG TACTTTATTA ACTTGTGCTC GGATGAGGCG
GATAAGGTGG AGAAGTCTCG GCAGAGGCTT GTAGACTCGT TAGACAGGGC GTATCATATG
GGGGCCTGGG TCGTTGTCGT CCACGCCGCC TACTATGGCA AGCTCGGCCC CTCTGGGTGT
TATGAAAAGG TGAGGGAGGA GCTGGCTAAG GCGTATAGGG AGGCGGGCGA GCCCTCTGGC
GTTTACATCG GCGTGGAGAT CACGGCGAGG AAGAACCAGT TTGGGAGCGT GGAGGAAGCG
TTTTCTCTCG CAAAGGAGTT GACGTTTGTC ACCCCCGTGA TAGACTGGGG GCACTTATAC
GCGAGGAACA ACGGAACTAT CGACTATGGG GCTGTCCTCG ATTTGTGGAA TAGGGAGTTC
CCGGGGAGGC ATATGCATAC ACATTTCACG TCTGTTAGAT ATCGCAATGG GAAATTTGTC
GACGAGCACG AGCCTGTTGA AGTGGGGAGG CCGCCCTTTG AGCCGCTTGC AAAACAGTTG
GCTGAAAGGG ACATGGCTAT TACGCTTATC TGCGAATCCC CCCTGTTGGA CAAAGATGCG
TTGTTTATGA AGGAGGTGTT GGAGCGCCAC GGCGTTAAAC TGTCTTAA
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| Protein sequence | MAKVWLGPAG IPQYVVKAKS TLDAVRVVRE LGLNAMEVEF VQGVRMSREL AKQVGKAAQD
HGVLLSVHAP YFINLCSDEA DKVEKSRQRL VDSLDRAYHM GAWVVVVHAA YYGKLGPSGC
YEKVREELAK AYREAGEPSG VYIGVEITAR KNQFGSVEEA FSLAKELTFV TPVIDWGHLY
ARNNGTIDYG AVLDLWNREF PGRHMHTHFT SVRYRNGKFV DEHEPVEVGR PPFEPLAKQL
AERDMAITLI CESPLLDKDA LFMKEVLERH GVKLS
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