| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1771 |
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| Symbol | |
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| ID | 4910245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1642910 |
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| End bp | 1644574 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640125518 |
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| Product | thermosome subunit |
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| Protein accession | YP_001056654 |
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| Protein GI | 126460376 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02339] thermosome, various subunits, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000503304 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCACAGC AGGCGCCAAG AACAGGAGTC CCCGTAATGA TTTTGAAAGA GGGGAGCCAG
AGGACCACTG GCGTAGATGC AAGGAGGTCT AATATACAGG CTGCAAAAGT TATAGCGGAG
ATCTTGGCTA CATCGCTAGG GCCTAGGGGG ATGGATAAGA TGTTGATTGA CGCCTTCGGA
GACGTCACCA TAACCGGCGA CGGCGCTACG ATTCTAAAAG AGATGGAGGT CCAGCACCCG
GCCGCCAAAT TGCTCATCGA GGTCGCCAAA GCCCAAGACG CCGAGGTTGG CGACGGCACT
ACGACGGTGG TGGTGCTCGC AGGCAAGCTA CTGGAGCTAG GCGAGGAGCT ACTTGAAGAG
GGTATCCACC CCACAATTGT AATTGACGGG TACAAGAAGG CGGCGGAGTA CGCCTTGAAA
GTTGCTGAGG AAATTGCGAA GCCCATAGAG CTCACAAAGG AGCAGTTGCT AAAGGTGACG
TCCAGCGCGC TTTCCTCAAA AGTTGTCGCA GAGACGCGCG ACTACTTGGC AGGCCTCGTC
GTAGACGCCG CGCTGCAGGC TGTGGAGATG AGAGACGGCA AGCCGTACCT TGACTTGGAC
TGGATTAAGA TTGAGAAGAA GAAGGGCAAG TCCATCTACG AGACGCAGCT CATCAGAGGC
ATAGTGTTAG ACAAAGAGGT GGTGCACCCC GGCATGCCTA AGAGAGTGGT CAACGCCAAG
ATAGCCGTGT TGGACGCGCC GCTTGAGATA GAGAAGCCGG AGTGGACTAC TAAGATAAGC
GTCACCTCGC CTGACCAGAT AAAGGCCTTC CTAGACCAAG AGGCCGAGAT TCTCAAGAGC
TACGTGGACC ACCTCGCCTC TATTGGCGCA AACGTGGTAA TTACACAGAA GGGCATCGAC
GAAGTTGCAC AACACTTCCT TGCCAAGAAG GGCATCTTAG CGGTTAGGAG AGTCAAGAGG
AGCGACATAG AGAAGCTCGC CAGAGCCACG GGCGCTAAGA TTATCACAAG CATAAAGGAC
GCAAGGCCGG AGGACTTGGG CACCGCCGGG CTAGTTGAGG AGAGGAAAGT AGGCGAGGAG
AAGATGGTCT TCGTAGAGGA GATACCCAAC CCGAGAGCTG TCACAATACT GGTGAGAGGC
GGTAGCGACA GAATACTGGA CGAGGTAGAG CGGTCTCTAC AAGACGCGTT GCACGTGGTA
AGAGACCTAT TCCGCGAGCC GAAGATTGTG CCAGGAGGTG GCGCGTTCGA GATAGAGGTG
GCAAGGAGGG TTCGCGAGTT TGCGAGAAAG CTGTCTGGCA AAGAGCAGTT AGCCGCCCTG
AAGTTCGCAG ACGCTCTTGA ACACATACCC ACAATACTTG CGCTCACTGC CGGCCTAGAC
CCAGTAGACG CCATTGCAGA GCTTAGGAGA AGACACGACA ACGGCGAGAT CACCGCCGGC
GTAGATGTCC ACGGCGGAAA GATTGCAGAC ATGGCCGCGT TAAACGTGTG GGACCCGTTG
CTCGTCAAGA AGCAGGTCAT CAAGTCCGCT GTCGAGGCGG CCATAATGAT ACTGCGCATT
GACGACATAA TCGCCGCCGG CGCCGCCAAG AAGGAGGAAA AGAAGGGCGG CAAGAAGGAG
GAGGGAGAGG AGAAGGAGGA GAAGGGGGAG TCTAAATTCG ACTAG
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| Protein sequence | MSQQAPRTGV PVMILKEGSQ RTTGVDARRS NIQAAKVIAE ILATSLGPRG MDKMLIDAFG
DVTITGDGAT ILKEMEVQHP AAKLLIEVAK AQDAEVGDGT TTVVVLAGKL LELGEELLEE
GIHPTIVIDG YKKAAEYALK VAEEIAKPIE LTKEQLLKVT SSALSSKVVA ETRDYLAGLV
VDAALQAVEM RDGKPYLDLD WIKIEKKKGK SIYETQLIRG IVLDKEVVHP GMPKRVVNAK
IAVLDAPLEI EKPEWTTKIS VTSPDQIKAF LDQEAEILKS YVDHLASIGA NVVITQKGID
EVAQHFLAKK GILAVRRVKR SDIEKLARAT GAKIITSIKD ARPEDLGTAG LVEERKVGEE
KMVFVEEIPN PRAVTILVRG GSDRILDEVE RSLQDALHVV RDLFREPKIV PGGGAFEIEV
ARRVREFARK LSGKEQLAAL KFADALEHIP TILALTAGLD PVDAIAELRR RHDNGEITAG
VDVHGGKIAD MAALNVWDPL LVKKQVIKSA VEAAIMILRI DDIIAAGAAK KEEKKGGKKE
EGEEKEEKGE SKFD
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