| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1429 |
|---|
| Symbol | |
|---|
| ID | 4909297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | - |
|---|
| Start bp | 1339080 |
|---|
| End bp | 1339562 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640125179 |
|---|
| Product | adenylylsulfate reductase, beta subunit |
|---|
| Protein accession | YP_001056315 |
|---|
| Protein GI | 126460037 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1146] Ferredoxin |
|---|
| TIGRFAM ID | [TIGR02060] adenosine phosphosulphate reductase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0667078 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTACAT TTGTATATGC CTCTCTGTGC AAGGGGTGCG GCAAGTGTGT AGACATATGC
CCGGCAGACA ACATGCACTA CAACCCCAAG ATAAGGAAGG CCTACAACGC TGACCCAGTG
TCGTGTGCCG AGTGTTTAAA CTGCGTCAAG TACTGCCCAG AACACGCGGT GGAGGTGAGA
GGATACAGCG ACTTTATCCC GCTGGGCGCC CGGATAGGCG TTGTGAGAGA TACCAAGAAG
AACATAATCT ACTGGCGCGT AATGTACAGA GACGGAACGG TGTACGAGTT CGCCTCCCCC
ATACGCACCA CCCCTTGGGG CTCGGCGAAG GGCGCGCTAG ACTTCCCCGA GAGGCCCGAC
CTAGACTCGG AGCTCCTCGC GCTGGAGGAC AACCCCGAGT TCTTGGGCTT TAAGGAGCTT
CCACGCCCGG CGCAGCCCGT GAGAATCGTG GGTAGTATAA TAAAGGCTAA GCAGGCGAAG
TAG
|
|---|
| Protein sequence | MPTFVYASLC KGCGKCVDIC PADNMHYNPK IRKAYNADPV SCAECLNCVK YCPEHAVEVR
GYSDFIPLGA RIGVVRDTKK NIIYWRVMYR DGTVYEFASP IRTTPWGSAK GALDFPERPD
LDSELLALED NPEFLGFKEL PRPAQPVRIV GSIIKAKQAK
|
|---|
| |