| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1050 |
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| Symbol | |
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| ID | 4909284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 990213 |
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| End bp | 991436 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640124802 |
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| Product | DNA primase |
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| Protein accession | YP_001055941 |
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| Protein GI | 126459663 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00972841 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGCGCTT TAACCATAGT AGCCAAGTAC ATGATAGTGG CGCAAATAGA GGTAAACGGC
GGAGTAGATA AATCAGACAT CATAGGCGCA CTGTTTTCCC AAACCGAAGG CCTACTAGGA
AAGGACATGG ACCTCAGAGA GCTACAAATG ATGGGGCGCA TAGGGAGAAT AGAGGTGGAC
ATACAGGAGA AGGACGGGAA GACAAAGGCG AAGATATACA TACCGAGTAA CTTAGACCGC
TACGAGACCG CGCTAGTGGC CGCTTTAATC GAGAGCATAG AAAGAGTGGG GCCCTACCCC
GCCACCGTAA AAGTGCTAGA AATCAGAGAC CTGAGAGAGG AAAAGAGGAA GAAAATCGTT
GAGAGAGCCA AGGAGCTGAT TAAAATGATA GAGGAGGAGA TACTGCCAGA CACCAAGGAG
ATAATTGAAA AGTTGAAAGA GGATGTGGCA AAGGCAGAGG TTGTGGAATA TGGGCCAGAA
AAACTGCCGG CAGGCCCAGA CGTTGATAAG TCGGATTGGA TCATCGTAGT CGAGGGGAGG
GCAGACGTCG TAAACCTTGT AAAACACGGC TATAGAAACG TAATAGCGCT AGAGGGGATT
AGCCGCGGCG TGCCTCAAAC CATCATCGAT TTAAGCAAGA GAAAATCCAT AACATTATTC
ATAGACGGCG ACAAGGGAGG CGAGATGGTG TTAAAGGAGT TAATGAAGGT TGCACACATC
GACTACGTAG CCCGCGCCCC GCCCGGCAAA GAAGTAGAAC AACTGACCGC TAAGGAGATA
GCAAAGGCGC TGAGGAATAA GGTAACACTG GAAGAGTGGT TGGCGCAACA GAAGGCGGGA
GCTGAGAAGA CCGAGGCCGC CGCTCCCCCG CCGCAACAGC CGACAGCCCC TCCAGCGGCC
CCCTCGCAAC AGCCCATTGC AGAGGTGCCT CAGGAGATTG TAAAACGGCT AGGCGACATG
CAAGGCACGC TCGAAGCCGA GCTCTACGAC ACTAACTGGT CTCTAATAAA GCGCATAGCC
GTGAGAGAGC TGCCCGACGA GCTGGCAAAC TCCACAGACT CTATCTACGC CATATTAATG
GACGGCATTG TCACACAGAG GATAGTGGAT TTAGCCGCAA AGAAGGGCGT AAAGATCATA
ATAACGGCGA GAGTGGGCCC GCTGACAAAG GTGCCAGAAG ACCTAAAAAT TGTAACCTTT
GAACAACTGC AGAAACTAGC CTAG
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| Protein sequence | MGALTIVAKY MIVAQIEVNG GVDKSDIIGA LFSQTEGLLG KDMDLRELQM MGRIGRIEVD
IQEKDGKTKA KIYIPSNLDR YETALVAALI ESIERVGPYP ATVKVLEIRD LREEKRKKIV
ERAKELIKMI EEEILPDTKE IIEKLKEDVA KAEVVEYGPE KLPAGPDVDK SDWIIVVEGR
ADVVNLVKHG YRNVIALEGI SRGVPQTIID LSKRKSITLF IDGDKGGEMV LKELMKVAHI
DYVARAPPGK EVEQLTAKEI AKALRNKVTL EEWLAQQKAG AEKTEAAAPP PQQPTAPPAA
PSQQPIAEVP QEIVKRLGDM QGTLEAELYD TNWSLIKRIA VRELPDELAN STDSIYAILM
DGIVTQRIVD LAAKKGVKII ITARVGPLTK VPEDLKIVTF EQLQKLA
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