Gene Pcal_0569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0569 
Symbol 
ID4909458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp539916 
End bp540359 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content50% 
IMG OID640124317 
Producthypothetical protein 
Protein accessionYP_001055462 
Protein GI126459184 
COG category[S] Function unknown 
COG ID[COG1371] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCTGTA GAAAACCAGC CAACTACAGA TATGGAGAAC ACACGGCTGA TGTGTTGGTT 
CAGGCGTTTG GGTGTACGCT TGAGGAGGCG TTTAAGAACG CGGCGGTGGC CTTAGCCGAT
CTCACGTACT ACAGCGAGAG GGTGGAGCCG CGTATGGCTA AAAAGGTCGA GGTTGAGTAC
GACGACCTAG AGGGCCTACT GTTTAAGTGG ATAGACGAGC TGCTCTTCCT CTTTGACGCG
GAGAAGTTCG CCTGGGGTAG GAATATTGAA GTTGAGCTAA GACAGGGGGT GGGCTACAGG
ATTTCTGCCA CGTTGCACGG CGAGATGTAC GACATCAACA AACACGGATT TACTGGCCTT
ATCGTAAAGG CCATGACTTT TCACATGATG GAGATTAAGA AGGTGGACGA CTATTGGGTT
CTTCAATACG TCGTTGATAT ATGA
 
Protein sequence
MSCRKPANYR YGEHTADVLV QAFGCTLEEA FKNAAVALAD LTYYSERVEP RMAKKVEVEY 
DDLEGLLFKW IDELLFLFDA EKFAWGRNIE VELRQGVGYR ISATLHGEMY DINKHGFTGL
IVKAMTFHMM EIKKVDDYWV LQYVVDI