Gene Pcal_0053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0053 
Symbol 
ID4910240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp54062 
End bp54373 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content53% 
IMG OID640123806 
Product50S ribosomal protein L14e 
Protein accessionYP_001054959 
Protein GI126458681 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2163] Ribosomal protein L14E/L6E/L27E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAAGG TTATAGATGT GGGCAGGGTC GTAGTCAAAG TGTTGGGCAG AGAGGCTGGC 
AGAAAGGCGG TGGTAGTGGA CATAGTCGAC GAGAATTACG TGGTAATTAC CGGCCCCAAG
TCGCTGAGCG GCGTAAGGCG CAGGAGAGTG AACATAAACC ACATCGAGCC CACAGACAAG
AAGATTGAGA TTAAGAAGGG CGCCTCTGAC GAGGAGGTGC TTAAGGCGTT AGAGGCGGCA
GGGCTTGTGG AGTACATGAA GGAGAGAGTA AAGCCGAAGC TGTTTGAAAT TACTCCAGCC
GACGTCAAGT GA
 
Protein sequence
MVKVIDVGRV VVKVLGREAG RKAVVVDIVD ENYVVITGPK SLSGVRRRRV NINHIEPTDK 
KIEIKKGASD EEVLKALEAA GLVEYMKERV KPKLFEITPA DVK