Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_80553 |
Symbol | NUP145 |
ID | 4850914 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | + |
Start bp | 422427 |
End bp | 426701 |
Gene Length | 4275 bp |
Protein Length | 1348 aa |
Translation table | |
GC content | 41% |
IMG OID | 640392622 |
Product | Nucleoporin NUP145 precursor (Nuclear pore protein NUP145) Contains: Nucleoporin NUP145N (N-NUP145) Nucleoporin NUP145C (C-NUP145) |
Protein accession | XP_001387319 |
Protein GI | 126273875 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGGCT CCACAAATAC AGGCAACAAT AACTGGGGGG CTTCTACCGG ATTTGCCAAG TCGTCGTCAT TTAGCGGACT TTCTGGTGGC TCTAATAGTC TCTTTGGGAA CTCTGGTGGG GCTTCATCAA ACACAAATTC AGCTGCTGGA ACACTTTTTG GATCAACAAA CGCCACCAAC CCAACTTCGG GGCAGGGTTC TGCCGTTTCC GGGGGTCTCT TCGGCAACTC TAAAGTCAAC AGTGGCAGTA CTTCCCAAGC TCTATTTGCC AAACCGGCTG GTGCAGGCGG TCTTTTTGGC AATTCAGGTA ATGCCAGTAA TCCTCAACAG ACTGCTTCAA CGGGAATGTC GTCAGGTTTG TTTGAGTCTT CAAAACGACA GGCTCCTTCT GGAACTTTTG GAAATCCCAC CAATAACACA GCTACAGCAT CCGGAGGACT CTTTGGAAAC TCGGGCAATA CAGTGCCGAC ATCAGGAGGA CTCTTTGGAA ATAGCTCTAC TAATAATGCC ATTTCTGGTG CCGGTCTTTT TGGTTCTAAT GCTGTTGGAA GCGGAATCGG ATCAATACAG AAACAAAATC AAAACATAGG TGGAGGTCTT TTTGGATCTT CTAATGCTAA TGTAGGTTCT AGTTTGTTTG GTGCTCCTCA GCAGCAGACT ACTTATCAGC CTACTATAAA TACCAGTAAC CCCTATTCAT ATGATAAGGT GCTAACCAAC CTCCAGACAA CGTTGTCGGG AATGCCGGAG TCTATAACTA ACAACCTCGT AGCAGAAGAC GAAGCAAAAG ATACTGGAGA CAGAAAAAGG CGATTCTCAT ACTTGGAAAA GAAATCCAGC GATAAGCCTC AATCAAGTCT ATTGGGAAAG TTAGGTAGAA CGTTCCGGGT GTTCAGAAAC TCGGCTGCTA GTACTGGACT TTCTAGTATC AGGGGTTTGT TTACAGACTC CAACTATACG AAGTCTAACA TAAACCAGAG CATATTGCCA AAACAGCAAG CCTCTGGAGG ACCCAAAAAT GGAGTGTCCA AACCTTCTTT CCGTTCTTCC GTCGATTCAC GTCGTATGGG CTCTATCAAG AAGTTGATCA TAAAATCCAA GCCATCAAAG TTCCATTTGA TAGATGCCGA CAGGGTAATC AATACCAAGA GAGCTAGATT GGCAAATGTA ACCAACTTGG GCAACGATAT TTTGCCAGAC AAGTACTCCA GTGATGAAGA TAGTGAAGGC GAACTGGAGC AAAACACTCA GAAGGGCTTT TCTAGATATC CGTACAATAT CTTGAAAGAT GACGATGTAA AGAACAAGTC TAATCTGAAG ACTATCATCG GCAAAAGTGT GGAACTTACT GAAGAAGTAG AAGAAGAAAG TTCTATAAAA TACAACAAAG ACGGCTACTG GTCGTCTCCT TCTATTGATG AGCTCTCTTC CATGTCTTTG GAAGAGTTAT CGTCCATAGA TAACTTCATT CTTGGAAGAA AGGGATTTGG ACAACTAGCC TACAATTTCC CTGTGGACTT GTCTCTTACA ATGCAAAGTG CTCAGTCCAA TAGAGTACTG TTGGAAAAAG AGCTTTTTGG CAATACCTTC CAACTTGAAA GAATGATTGT TCTTCTCTAT ACTAATGATG CTCATAATAA GCCACCTATA GGTATGGGAC TCAATGTTCC TGCTACAGTG ACTTTAGAAG GTGCAAAGCC CAGGGAGGGC GTTCCAGTAG GAGATTACAT CAAGCAATTG AAGCTCCAGA AAGGTATGGA GTTTGTCACC TATGACCCCA TCACTTTTGT ATGGGTGTCC AAAGTCAAAC ATTTCAGTGT GTGGGGTTTG ATTGAAGATG ATGGAACTGA ACTCTCTAAG AAGTACATGG AAATGAAGAG AAAACAAGAC GAATATGAAG AAACTGCTGA GTTGGAATAC TCCAGAGTCT ACGAGAATCG TGAGTACCTT CAGGAAATCA AGAAACAGAA GCTTCTCAAT CAGACCATAG CTGTACCCGG TGGTTGGAAA TATGCCAATA CTACACAGCA AAGTCCGTTA GATTTCAAGA GAAAGCTTCT TAACAATGAG ATCAACAGCC AATTGGATTT ACATAGAAAG GAAAATGTTG TTAATGAGTT GTCACATGTC AGCGATATAA CACTTGACTC AGATGAAAAC GACAGATCTG TCTCACCAGA CAGTATTGTG TTTGCTGAGA ATGAAGACTT GTCCGATGGT GGAAACAACT TTGACTATTT AAAACAATTG GTGGGTAACC TCCCTGCCGA TGTTGATATG GATGAGATCG TCAATGAGAA GGCTTATGAG CCAGAAATTG TTAACGATGC CGTATTCGAT AGCATTCAGA TTTGGCCCAA CTTGGCTACT TCAGAAGATT GGATTGTCCA GTTGAAGTTG GCGAATGACA TGAACAGTGC CTTGGCTCAG TCTTTTGGAG ACTCTGAAGG AGCCAAGAAA CAAATCTCCC CTGAAGATAT CGATGCCGTC TTGTTTGCTG ATTTCAATAG AGAATCGTTA AAGAAGGATC AAATTTCAAC TCCAAGCAGA GACAACAAAT TGGCTGTGAT TGAAGATATT GAACCACAGG TTGATGACGA GATTTTCCCC AACAACATTT CTAGAATCCT CTATGATTTT TTGACCAAAA CAATTATTGA AACCAGGACT AACTCTTACC CTAAAGTTGT AGAGACATCT GGTTTGTCGT TTGTCAGTCT CATTACTAAT GATCTGGTGA AGGATGAGAA ACAACTCTTT TCACTCGGTG CCTCACTTTT CGACAAATTG TCCACCGAGA AGTATACCGA ACTTGAACAA AATATAGTGA ACTACTTGAA TGAAACAGGA AGGAAGAGAG CTTTCAATAT TTGGTTGAAA GAGTACAATT CGAACGATAT TGAGATTCTC ATTAGCCAAG TTCAGTCCAA TTCCTTGGAA CTCATTTTTG TATATGTTTG TGCTGGTGAC TTGAAGGAAG CCATCAACAT AGCCCTAGAA TCTAACAATT CGCATTTGTC TGTTATCTTG ACCTTAACAG ACTCCAATGA TGATGCGGTG AGGGGCATCG CTAGTCAACA ACTAAAGGCA TGGAGAGACT CTTCATCATT ACACTTGATA CCTAGTCCTG TTGTCAAGAT CTATAAGATT TTGTCAGGCG AATTTGATGA CTTTGTCAAT GAATTGCCCT GGAACATCAA CTTGGCTTTG AAATTATACT ATGGAGATGA AAGTGCCAAG TTGCATGAAG TTCTTAATGA TTCACTTGAG AGATCTGATA ATGCTGCCTC TCAAGCTAGT GAAGTTATTG ATATTTTGCA AGTTTACTGC AGTTTCCAAA CCGATGGTAA GGATAAAGCG CTAAAGAAAT TGATCAGCTC ATCGTTGAAT AGCAAGTTGA AGTGGTTTTT CTTCAAAGTG ATTTCTTCAG ATGTTGTCGA TACTACGTTT GATGGCATTT CCTTGTCGTT TGGGATGTAT TTGGAGAGTG TCAAGTTGTG GAAAGAAGCA ATTTTTGTCT ACTCCCATTT GTCGGATGAC GAACAGAGCA AAAACAAATT GAGAGATGTA GTGATTTCTA GTATCAAGAA CATTAACAGT GACGACAAGA ATTATTTGGT CTCGGTGTTG AAGGTGCCCA CTGGTTTGCT TTCAGAAGCT ATTGGCATCA GCAAAGGAGC TGATGGTGAC CACTGGGGTG AATGCGAAGC TTTCATAGAT GCCCAGTTGT GGGAGAATGC ACATTTCGTG ATCATAACGA AGTTGGGTCC GCATGTGGTC ATTTCCAAGA ACAAGAACGC AGAAAACAGC TTGCTTGAGT TGATTTCTCG CTTTCCCCAG AAAGGTACGA TTATCTCTAC ATGGAACAGC GGGGCCGGAA TCTATGAAAA GTACATTGCC TTGACCAGAG ATGAGAACAA CATAGAAGTG TTAAGGTTCT TGTTGTCGAA TATTCCCTTA GCTAAGGAAA TCTCTAGCTT TGAAACCAAG AGTGCTCTCA AGATCATTTC TAGAAAGGTT GGGGATGTTG CTATAGAAAA GAGAAGCGAT GTTGACGGTG TTGAAGGTAA GGTCCAGCAG TTATATCTTG GTGAAAGTGA GAAGAAATAC TTTTCCGTGA GACTCCAGAC AGATAATGTA TGAAGAGTAA AGGAATTGTA CAGTAGTATA GCATAGAACA GTAATATAGC GAAGAAAGGT AATATAATAG TAAATATTTT GCACGAAAGT TGTGCAGCAG TCTATAACAG AATAATATTA CGGTAGAGTA GTAGA
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Protein sequence | MFGSTNTGNN NWGASTGFAK SSSFSGLSGG SNSLFGNSGG ASSNTNSAAG TLFGSTNATN PTSGQGSAVS GGLFGNSKTA STGMSSGLFE SSKRQAPSGT FGNPTNNTAT ASGGLFGNSG NTVPTSGGLF GNSSTNNAIS GAGLFGSNAV GSGIGSIQKQ NQNIGGGLFG SSNANVGSSL FGAPQQQTTY QPTINTSNPY SYDKVLTNLQ TTLSGMPESI TNNLVAEDEA KDTGDRKRRF SYLEKKSSDK PQSSLLGKLG RTFRVFRNSA ASTGLSSIRG LFTDSNYTKS NINQSILPKQ QASGGPKNGV SKPSFRSSVD SRRMGSIKKL IIKSKPSKFH LIDADRVINT KRARLANVTN LGNDILPDKY SSDEDSEGEL EQNTQKGFSR YPYNILKDDD VKNKSNLKTI IGKSVELTEE VEEESSIKYN KDGYWSSPSI DELSSMSLEE LSSIDNFILG RKGFGQLAYN FPVDLSLTMQ SAQSNRVLLE KELFGNTFQL ERMIVLLYTN DAHNKPPIGM GLNVPATVTL EGAKPREGVP VGDYIKQLKL QKGMEFVTYD PITFVWVSKV KHFSVWGLIE DDGTELSKKY MEMKRKQDEY EETAELEYSR VYENREYLQE IKKQKLLNQT IAVPGGWKYA NTTQQSPLDF KRKLLNNEIN SQLDLHRKEN VVNELSHVSD ITLDSDENDR SVSPDSIVFA ENEDLSDGGN NFDYLKQLVG NLPADVDMDE IVNEKAYEPE IVNDAVFDSI QIWPNLATSE DWIVQLKLAN DMNSALAQSF GDSEGAKKQI SPEDIDAVLF ADFNRESLKK DQISTPSRDN KLAVIEDIEP QVDDEIFPNN ISRILYDFLT KTIIETRTNS YPKVVETSGL SFVSLITNDL VKDEKQLFSL GASLFDKLST EKYTELEQNI VNYLNETGRK RAFNIWLKEY NSNDIEILIS QVQSNSLELI FVYVCAGDLK EAINIALESN NSHLSVILTL TDSNDDAVRG IASQQLKAWR DSSSLHLIPS PVVKIYKILS GEFDDFVNEL PWNINLALKL YYGDESAKLH EVLNDSLERS DNAASQASEV IDILQVYCSF QTDGKDKALK KLISSSLNSK LKWFFFKVIS SDVVDTTFDG ISLSFGMYLE SVKLWKEAIF VYSHLSDDEQ SKNKLRDVVI SSIKNINSDD KNYLVSVLKV PTGLLSEAIG ISKGADGDHW GECEAFIDAQ LWENAHFVII TKLGPHVVIS KNKNAENSLL ELISRFPQKG TIISTWNSGA GIYEKYIALT RDENNIEVLR FLLSNIPLAK EISSFETKSA LKIISRKVGD VAIEKRSDVD GVEGKVQQLY LGESEKKYFS VRLQTDNV
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