| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_80259 |
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| Symbol | CLU1 |
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| ID | 4851211 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 1204845 |
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| End bp | 1208932 |
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| Gene Length | 4088 bp |
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| Protein Length | 1242 aa |
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| Translation table | |
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| GC content | 42% |
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| IMG OID | 640392919 |
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| Product | accessory factor to EIF3 |
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| Protein accession | XP_001387877 |
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| Protein GI | 126274197 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0940196 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATTCCAGACA ACAACCATGT CTGGTGAGAC CCCTGTGAAA CCCGTCGAGG TTGACAATGA
TGTGGAAGCC CTCGAGTCAG CCAAAGAGCT CAGCTTGAAG ATTGACTTAC CAGCTTGCTT
AAATGCTGGA GACAGCTTGC TGATTCCATC TAACTATGAC GAAACCATCA ACGACTTGAA
ACAAGCTCTT AGCCTTTTGC CTCTCAGCAG AAGCTTAACC AACTACACTA TCTACATAAA
TGGAACCAAT GTCTCAGACT CAGTAGACGA TCTTACCACT TTCTCGCAGT TGTTTGAACT
CTTCCAATGG GACTCTGTAG ATTTGTTGAA AGTAACCATC AAAGAAAGAG CTTATACATT
GGCTGCAGTG TATGAGCAGA TTTCTCGTTT CAGAGAGATC ATTGGTTTGC ATTATGTGGA
CAGAATGGCT GAAGATCTTG GAGTTGCTAG CGGTGTTTCC AGATTGAACG AGTTGACATT
GAACGCTGTG AAAGAAAGAG AGAATCAAGA AGAAAAAGAT AGAAATGAAA AATCTGAAAA
AGACGAAAAA GACGAAAAAT CTGAAGAAAC TGAAGAATCT TTTGTTCTCA ATGAAGAAGA
CATAAAGTCG CTTAAGATTT CTGCTGAAGA TTTGTCTTCC ACCATTGACA TCGATCTTGC
TGCTACTGCT GCTTCATTCA ACAACATACA CACCAAGATC AAACTTCCAA TCAAGTCTTT
GACTATTTCA CAATGGTCTC CTGTTCCAGC TTTCCAGAAG AACAAAGGTG ACTTGTTGTA
CTTGACTTTG CAGACTTTGG AAAACGAAAC TTTCAATATC ACCTGCCACT TTTCTGGTTT
CTTCGTGAAC AGAAGTTCTA CTGTTAACTT CAATCCAGAA GTCAAGGTGA ACGAGAAGGG
TCAAGTGTCC AAGAACTACT TACTTGTCAA CTTGGTAGAC TCGTTGTCGC CTTCTTTCTC
GAAAGTTCTT GAAGAAAATG AACTTAGCTT ATCTACTTCC AGTGAACATC CAGAGACCTA
TTTGTTGCCT AACAACTCAT TCTTGGCTAC ACCTTGGTAC ATCGATACCG TCCACGCCAA
AAACTATCCT GATGTATCGA GATCTCAATT GCCATTGATA CTTAACGGTG TAGATGGCTC
TGATTACGTC AAGGACTGGA ACGAAGACTT CCAGTCTGTG CGTGAGTTAC CCAATACAAA
CATTCAAGAA CGTATCTTGC GTGAAAAGTT GATCCAAAAG GCTCTTTTCG ACTTCACCAA
AACTGCTACC GACACTTCCG TCAACATTAT CAAGGGCAAC TTGACTCCTA TGAATCCTAA
CGAAGAAGAG GGAAAGCATA TCTACTTGAA GAACGGGATC TTCTATGCAT CTGATGCTAC
CTCTGTTGAG GTCTTTGAAG CTACTGGTGC TGAAGAAGCT GCCAGATATG TTGCTTCGAA
AGACTTGGCT GGTGTGAAAG TGTTGAACAA AGCTGATGTT CCCGGTGTCA ATAATTTGGT
CACCTGTATT GTAGATTACT TGGGTAAGAG AATTGTGTGT CAAGCTCCTG TTCCCGGTAT
CTTCAATGCT GCTGCAGAAG GTGAAGAAGA AAAGGTTGTC TACGGTTTGT CTACTGACGG
TTCTACTATT CTGCAAGACA AGTCGTTTGA AGAGCCTTTG AAGCAAATTG CTGAAGTCTT
CCACTTGAAG CCTCACACTG TAGAAGTTTC TGATGAGATC AAGTCAGAAT CAGAATTGTT
GGTTTCTAAA GACACCAAGG GTATCAAAGG TACTGACTCT CGTAAGTATG TTATTGACTT
GTACAGAACT ACACCTCGTG ACATTCAGTT TACCGAAGCT CACTTCGATG CTAGCAACGA
TACCTCCTAC CCACACGGAG AGTCTCTTCT CAGACATGAA GCTGTAGCTG AATGGTGGAA
GCGTAAGGTC TCTGCCTTGT TTAAGGCTGA AACCGAGAAG TTGGAAAAAG AAGGAAAGAT
GGAAAGCAAG GATGGCGAAA AGCCTCAGAT TGTCTTGCCT ACTGACCAAG TTGTTTTCAA
CCCTGATGCT TTCTCGTTTG ACTCTGAAAG CGACGAAGAC AGAGAAGTTG TGAGAAACTT
GTCTAAGTTT GTCAAGGAGA AGTTGATTGA GGAGTTCTTA ACTGAATTCC CAAGTCAAGT
AGCCCCTTTC GACGGTCAGC AATTGACTAG TATCTTGCAC AGACAAGGTA TTAACATGAG
ATATTTGGGT TACATTGCCG AACAAGCCTT ATTAAGGAAA CAGGCTGCTT CTGAGAAGCT
TTCTGAGACA GTTGAAGACA ACTTGAAATT GGTCGCTGAA GCAAAGGAAA AGGCAAAAGC
TAAGGCTGAA GCTGAAAGTA AGGAAGCAGA AGCCAAAAAG GAATCTGATA AAAAAGAAGA
ATCGAAAGAA GGACTGTCTG AAGACAAAGA GGAAGATGAA CAAACGAAGG CTACTTATGA
ACCCACTCTT GCCAACTACG ATGCTCTCTA CCGCGTAACT GTTCAAGAAA TGATTGCTAG
AGCAGCCAAG CACTTGTTGC GTAAGTTGTC AGCTGATGTT CCAGTCAATT TGTTTGCTTC
TTTTGTGGCA CACTTCCACA ACTGTTTACT TGGAGCTGCT GTTAATGCCC AACCTGCTGT
TGAAATTGAA GAGTTGTATA GGTCATTCTA CCCTGAATCA GCTTTCAACT TTACCAAATT
GAATTCCGAC CAGGTTATTG CATTGATCAC AAAGGAAGTC TTCCTTCGTT TCAGATACGC
TTTGCCAGAA GATTGGTCTT CGGTTTTGAT CCATCCAATT CCTTTGATGA GAGAAATCGC
TCTCAAATTT GGTATTCAGT GGAAGGCTCA AAAATATGTT TTCACTGCTC AAGAGTTCGC
TGCTTACAAA GAAAAGTTTG CCACTACTTC CAAGCAGGTT GAAACTGCAA AGTCCAAGAA
GAAGGGCAAG AAAATTCAGG TTGTCACTGA AGTCGTTTCG GAAAGAGACT CCATCTTTGT
CGCTGACGAC ATAGTCAACT TTGTTCCAAT CGTCAAGGAC TCGAGCTACA AGGCTTCTCT
CATAGATGAA ATCTTCCAGA GTGCCAGATC CCATATCGCT CTGGGTGAAA AGGATGTAGG
TCTCTCTATT TTCAACGAAT TGGTAGCTAT TCAAGAACAA ATCTATGGTA GAGTCAATTC
TGAAACTGCA AGATTCTACA CCTTACTTGC ACAAGTCTAC TCTGAGCTTG GTTATCAATC
GCAAGCTGCG TTTGTTTCTC GTAAAGCTAT CATCTTGTCG GAAAGAACTA CTGGTTTTGA
TTCCTATGAT ACCATTACTG CCTACTTGAA CTCTGGTTTC TACGAAGCTG CCAACTTTGA
CTTGATCAAT TCTGTCAGCT TGTACAATCA GGCTGTTGCT ACTTGGACTT CTGTTTACGG
AAAGGGACAT CCAACTCTCA TCAATACTTT AACCAACATT GCTGAAAATT ACTCTAGGGC
CAGTCAAAAT GAGTCTGCGA TCAAGCTTCT TGAATCTGCT CTTGAATTCT CTAAGCTTGC
CAACGGAGAA GTTTCTGAAA TTACAGGTAT TGTGACTTTC AGATTGGCTA ACTGTTTGAT
CAACACCAGC AAGTTTGACC AATCTTTAGA ATTGTACCGT GCTTGTGAGG CCACCTTTGA
GAAGGTTCTC GGCCCAGATG ACGCTTTGAC TAAGCAGGCT TCAAAGTACG TCTCCAGCAT
TGAAACCTAT GTCAAGTACA TGGCTGCAAG GGAAGAACAG AGAAAGAGAG AGTTAGCTCA
GCAAGCTGTT GCCTCTGGAA ATAGCAAGAT CAAAGTCAAG TCTCAGACTG AAACTGTGAA
GAATGGCAAG AAGAATGGTA AGAAGTCGGC TATTCCACAA CCAGACCCTG AAATCGCTTC
CAAGTCTATT GACGATATCT TACAGTTCAT TGAAGGTAAC AATCCAAAGA AGTCTAGCAA
GAAGAGCAAG AAGTCGAAGA AGTAAGCATT AGTTAAAATG ACGTTAAAAT CTTATTTATA
TCTTGTCCAT ATTATTGTAC ATAGTCCAAA ACAAATATAA CTTTACCTAA AGTACTGTTG
CAGTCATG
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| Protein sequence | MSGETPVKPV EVDNDVEALE SAKELSLKID LPACLNAGDS LLIPSNYDET INDLKQALSL
LPLSRSLTNY TIYINGTNVS DSVDDLTTFS QLFELFQWDS VDLLKVTIKE RAYTLAAVYE
QISRFREIIG LHYVDRMAED LGVASGVSRL NELTLNAVKE RENQEEKDRN EKSEKDEKDE
KSEETEESFV LNEEDIKSLK ISAEDLSSTI DIDLAATAAS FNNIHTKIKL PIKSLTISQW
SPVPAFQKNK GDLLYLTLQT LENETFNITC HFSGFFVNRS STVNFNPEVK VNEKGQVSKN
YLLVNLVDSL SPSFSKVLEE NELSLSTSSE HPETYLLPNN SFLATPWYID TVHAKNYPDV
SRSQLPLILN GVDGSDYVKD WNEDFQSVRE LPNTNIQERI LREKLIQKAL FDFTKTATDT
SVNIIKGNLT PMNPNEEEGK HIYLKNGIFY ASDATSVEVF EATGAEEAAR YVASKDLAGV
KVLNKADVPG VNNLVTCIVD YLGKRIVCQA PVPGIFNAAA EGEEEKVVYG LSTDGSTILQ
DKSFEEPLKQ IAEVFHLKPH TVEVSDEIKS ESELLVSKDT KGIKGTDSRK YVIDLYRTTP
RDIQFTEAHF DASNDTSYPH GESLLRHEAV AEWWKRKVSA LFKAETEKLE KEGKMESKDG
EKPQIVLPTD QVVFNPDAFS FDSESDEDRE VVRNLSKFVK EKLIEEFLTE FPSQVAPFDG
QQLTSILHRQ GINMRYLDEQ TKATYEPTLA NYDALYRVTV QEMIARAAKH LLRKLSADVP
VNLFASFVAH FHNCLLGAAV NAQPAVEIEE LYRSFYPESA FNFTKLNSDQ VIALITKEVF
LRFRYALPED WSSVLIHPIP LMREIALKFG IQWKAQKYVF TAQEFAAYKE KFATTSKQVE
TAKSKKKGKK IQVVTEVVSE RDSIFVADDI VNFVPIVKDS SYKASLIDEI FQSARSHIAL
GEKDVGLSIF NELVAIQEQI YGRVNSETAR FYTLLAQVYS ELGYQSQAAF VSRKAIILSE
RTTGFDSYDT ITAYLNSGFY EAANFDLINS VSLYNQAVAT WTSVYGKGHP TLINTLTNIA
ENYSRASQNE SAIKLLESAL EFSKLANGEV SEITGIVTFR LANCLINTSK FDQSLELYRA
CEATFEKVLG PDDALTKQAS KYVSSIETYV KELAQQAVAS GNSKIKVKSQ TETVKNGKKN
GKKSAIPQPD PEIASKSIDD ILQFIEGNNP KKSSKKSKKS KK
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