| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28177 |
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| Symbol | CCT8 |
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| ID | 4850956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 549630 |
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| End bp | 551279 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | |
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| GC content | 44% |
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| IMG OID | 640392664 |
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| Product | component of chaperonin-containing T-complex |
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| Protein accession | XP_001387338 |
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| Protein GI | 126273917 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02346] T-complex protein 1, theta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.474469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.235435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCTTA AACTTCCACA AGCTCCCAAT TCCGGGTTGT TCAAGAGTGG CTACCTGTCG
ATCTCCAACG AAGATGGAGC CATCATCAGA AACATTGAGG CTGTTCGTGA AATTTCCACC
ATTCTCTTGA CTTCGATGGG TCCCAGTGGC AGAAACAAGA TCATTGTTAA TAAGCTCGGC
AAGATTTTCA TCACTAACGA TGCTGCAACC ATGCTCAAGG AGTTAGAGGT CGTCCATCCT
GTTGTCAAGA TCTTGATCAT GGCTTCTCAG CAACAGGAAT TTGAGATGGG TGACAATACC
AACTTTGTGA TAATTTTGGC TGGTGAACTT TTGAACATCG CTGAAAAGTT GTTGACTTTA
GGATTGAATG TCACCGAAAT CGCCCAGGGC TACACTTTGG CCAACAAATA TGTCGCTGAG
ACCTTGAACG ACTTGGTAGT TGACAAGGTG GATTCGGTTC TTGAAGCTTC TCAATTGACC
AAAGTCATCA AGCCTGTCAT CGCTGCTAAG CAATACGGTT ACGAAGATTT GATTTCAAAA
CTTGTAGTTG AAGCCGTTCA GAGTATCATA AATCCTAAGA ACCCTCTGTC CTTCAATGTG
GACAGTGTAA GAGTCGTCAA GATCATGGGT GCTTCGTTGA ACCAGTCTTC CGTAGTTAAG
GGTATGGTTT TCCCTAGAGA GCCAGAAGGA ACCATCAAGA ACATCAACAC CAAGTCTAGA
GTAGTTGTTT TCACGTGTCC AATCGATATT TCTACCACAG AAACCAAGGG TACAGTGCTA
TTACATAATG CTCAAGAAAT GTTGGATTTC TCTAAGGGCG AAGAACAACA GTTGGATGAC
ATGTGTAAGG AAATATATGA TTCTGGGGTC AAAGTGGTTG TTGCTGGTTC CAATGTGGGC
GAACTCGCAT TGCACTACTT CAACAAATAC GGTATTCTTG TCTTGAAGGT GCCTTCCAAG
TTTGACTTGA GAAGAATCTG CCAGGTCTGT GGTGCTACTC CATTGCCCAG ATTAGGAGCA
CCAATGCCAG ATGAAATGGG TGACATCGAT ATTATAGAGA CAAAGGAGAT TGGTGGAGAC
AGAGTCACCA TCTTTAGACA AGAAGAATCG ATTTCCAGAA CTGCCACTAT CATCATCCGT
GGTGCCACCC AAAACAACTT GGACGATGTA GAAAGAGCCA TCGATGACGG AGTAAATGCG
ATCAAGGGGT TGTTGAAGGA CAACAGGTTG TTGCCCGGCG CTGGTGCCGT AGAAATCGAG
TTGATAAAGC GTGTAACAAA GTACGGAGAA AACACACCGG GCTTGATGCA ATTAGCTATC
AAGAACTTTG CAAAGGCTTT TGAAGTTATC CCTAGAGTTT TGTCTGAAAC TTCTGGATTA
GATTCTTCGG AAATGTTGAG TAAGCTTTAC GCGGCTCACT CTACTGATGA CAACATCAAC
CTCGGTATCG ACATCGACAA TGACGATTTA CTTGATGTCA CCCAAGCTGG TATCTACGAC
TTGTACTCCA GTAAGAAGTC TGCCATTAAC TTGGCTGTAG ATGCCACCAA CACCATATTG
TCTATAGATC AAATCATCAT GGCCAAGAGA GCTGGAGGCC CTCAGATGCC AAAGCAGCCT
AGACCTGGTA ACTGGGATCA AGATGATTAA
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| Protein sequence | MSLKLPQAPN SGLFKSGYLS ISNEDGAIIR NIEAVREIST ILLTSMGPSG RNKIIVNKLG
KIFITNDAAT MLKELEVVHP VVKILIMASQ QQEFEMGDNT NFVIILAGEL LNIAEKLLTL
GLNVTEIAQG YTLANKYVAE TLNDLVVDKV DSVLEASQLT KVIKPVIAAK QYGYEDLISK
LVVEAVQSII NPKNPLSFNV DSVRVVKIMG ASLNQSSVVK GMVFPREPEG TIKNINTKSR
VVVFTCPIDI STTETKGTVL LHNAQEMLDF SKGEEQQLDD MCKEIYDSGV KVVVAGSNVG
ELALHYFNKY GILVLKVPSK FDLRRICQVC GATPLPRLGA PMPDEMGDID IIETKEIGGD
RVTIFRQEES ISRTATIIIR GATQNNLDDV ERAIDDGVNA IKGLLKDNRL LPGAGAVEIE
LIKRVTKYGE NTPGLMQLAI KNFAKAFEVI PRVLSETSGL DSSEMLSKLY AAHSTDDNIN
LGIDIDNDDL LDVTQAGIYD LYSSKKSAIN LAVDATNTIL SIDQIIMAKR AGGPQMPKQP
RPGNWDQDD
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