| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_4114 |
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| Symbol | |
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| ID | 4845827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 4821445 |
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| End bp | 4823496 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640121380 |
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| Product | type IV pilus secretin PilQ |
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| Protein accession | YP_001052448 |
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| Protein GI | 126176299 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000574817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCTT CTGCCGCGAT AAAAGTCCCG TTATTATCTT CAGGCTTAAT CAAGTCTGTC
ATAGGGATCG CACTGGTATT TGGAATTTTG CCATCGAGTT TTGCGGCAAA TCGATTAATG
GATGTGAAAT ACCACGCCTT GGTTGACCAT CAATTGGAGC TAGAGCTGGT CTTTGAAGAG
GCTGTCACTC CGCCTGCAAT AGACTCAAAT GCCTCGCCCG CAGAGCTAGT GCTGACCTTC
GATAATAGTA TCTCAGGTTT ATCTAAGGAT CGTTTACCTA TTAACCAGGT CGGGGTGACA
GACATCACCA CTGAGCAACA AGATACTCAC CTTAAAGTCA TCTTAGGTAT GTCCAAAGTG
AAACCTTACC AAGGTTCTGT CATGGGCAAT TCATATCGAC TCACAATTAA CGATGAAGTG
GCGGGTACTC AAGCCCAAGC TGAAAACCCT TTCGTTAATA GCATTAAAAA TATCGATTTC
CGTCGTAATG ATAATGGTGG CGGTGAGTTA TTGGTCTATC TAAATAATCG CTCGGTTGCG
GCTAATGTCG AGCAAGTGGG CGCTAAGCTC GAAGTGAAGT TATATAACAC AGATATTAAT
AACGATCTTC TGTATGTTAT GGATGTGAAA GACTTCTCCA CACCGGTAAA AAGTTTCGAG
ACCTTTAAAG AAGACTTAAC AACGCGCATA TTAGTTGATA TCGCTGGCGA GTATGAATTC
ACTTACAAAC AAGAAGATAA CCTCTTTAGA CTCTCAATGA ATAAAGTCGA GAGAGCCGCC
GCCAAGAAAG ATGTTAAAAA GTACAATGGT CGAACTTTAT CGCTTAACTT CCAAAATATC
CCAGTGCGTA CTGTGTTGCA GATCATCGCC GACTATAACA ACTTTAACTT AGTCACCAGC
GATACTGTGG AAGGCAATAT CACCTTAAGA TTGGACGATG TGCCTTGGGA TCAAGCTTTA
GAATTAATTC TGCAAACCAA AGGATTAGAT AAGCGTATCG AAGGCAACAT CTTAATGGTG
GCGCCGAGCG AAGAACTGGC AATTCGTGAA AGCCAAAACC TTAAAAACAA ACAAGAAGTT
AAAGAGTTAG CACCGCTCTA TTCTGAGTAC TTGCAAATTA ACTACGCTAA AGCGGTCGAT
ATTGCTGAGT TATTGAAAAG TGCTGACTCG AGCTTACTTT CACCACGCGG TTCAGTCGCG
GTCGATGAAC GCACTAACAC AGTGTTAGTG AAAGATACGG CTGAAACGAT TGAGAACATT
CACCGTTTAG TCGAAGTGCT CGATATCCCC ATCCGCCAAG TGTTGATCGA GTCACGCATG
GTGACAGTGA AAGATGATGT CTCCGAAGAC TTAGGTATTC GTTGGGGCGT CACAGACCAG
CAAGGTAGCA AGGGAACCTC TGGCACATTA GAAGGTGCAC AGAGTATTGC CAATGGGATA
ATTCCTACTG CAGATCAGCG TTTGAATGTT AACTTGCCCT CGGCGGCCTC CAATCCAGCG
AGTATTGCCT TTCATGTCGC CAAATTGGCG GACGGTACCA TTCTTGATTT GGAATTAAGT
GCGTTAGAGC AAGAAAATAA AGGTGAGATC ATCGCTAGCC CTCGTATTAC CACCTCTAAC
CAAAAGGCGG CTTATATTGA GCAAGGTGTC GAGATCCCTT ATGTGCAGTC TACTTCGAGT
GGTGCAACGT CAGTCACGTT TAAGAAGGCG GTGTTGTCTC TACGGGTTAC ACCCCAAATT
ACGCCTGATA ACCGAGTCAT TTTAGATTTA GAAATCACTC AAGATTCTCA GGGTAAAACC
GTTGATACTC CAACGGGTCC AGCAGTCGCC ATCGATACTC AACGCATCGG CACCCAAGTG
CTCGTTAATA ACGGTGAAAC TATAGTGCTT GGCGGTATTT ATCAGCAAAA TCTGATCAGC
CGTGTGAGTA AAGTACCAAT TCTAGGTGAC ATTCCTCTGG TTGGTTTCCT GTTTAGGAAC
ACAACAGACA AAAATGAGCG TCAAGAGCTA CTTATTTTCG TCACCCCCAA AATAGTCGGT
GAGAAGATCT AA
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| Protein sequence | MKSSAAIKVP LLSSGLIKSV IGIALVFGIL PSSFAANRLM DVKYHALVDH QLELELVFEE
AVTPPAIDSN ASPAELVLTF DNSISGLSKD RLPINQVGVT DITTEQQDTH LKVILGMSKV
KPYQGSVMGN SYRLTINDEV AGTQAQAENP FVNSIKNIDF RRNDNGGGEL LVYLNNRSVA
ANVEQVGAKL EVKLYNTDIN NDLLYVMDVK DFSTPVKSFE TFKEDLTTRI LVDIAGEYEF
TYKQEDNLFR LSMNKVERAA AKKDVKKYNG RTLSLNFQNI PVRTVLQIIA DYNNFNLVTS
DTVEGNITLR LDDVPWDQAL ELILQTKGLD KRIEGNILMV APSEELAIRE SQNLKNKQEV
KELAPLYSEY LQINYAKAVD IAELLKSADS SLLSPRGSVA VDERTNTVLV KDTAETIENI
HRLVEVLDIP IRQVLIESRM VTVKDDVSED LGIRWGVTDQ QGSKGTSGTL EGAQSIANGI
IPTADQRLNV NLPSAASNPA SIAFHVAKLA DGTILDLELS ALEQENKGEI IASPRITTSN
QKAAYIEQGV EIPYVQSTSS GATSVTFKKA VLSLRVTPQI TPDNRVILDL EITQDSQGKT
VDTPTGPAVA IDTQRIGTQV LVNNGETIVL GGIYQQNLIS RVSKVPILGD IPLVGFLFRN
TTDKNERQEL LIFVTPKIVG EKI
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