| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_2895 |
|---|
| Symbol | |
|---|
| ID | 4844339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 3408984 |
|---|
| End bp | 3410489 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640120142 |
|---|
| Product | amino acid/peptide transporter |
|---|
| Protein accession | YP_001051246 |
|---|
| Protein GI | 126175097 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3104] Dipeptide/tripeptide permease |
|---|
| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000544318 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTAG CAAAACCACA AGGAACGATG CTTGGGCATC CTAAGGGATT GTTCCTGCTG
TTTACAACAG AACTTTGGGA ACGTTTTAGT TATTATGCAA TGCGCGCCAT TTTGGTACTT
TATCTAGTCG ATAAAGTGCA GAGTGATGGC GGGCATGGTC TAGGTTGGAC TCAAGCAGAA
GCATTATCCC TTTATGGTAC CTTCACAGGG TTAGTCTACT TAACGCCACT TATCGGCGGC
TGGTTAGCCG ATAACGTACT GGGTCAACGT AAAGCCATTT ATTTTGGTGG CGCTTTAATG
GCTGCGGGTC AATTCTTACT TGCTGCACCT CATAGTTGGA TCCCAGGTTT AGAAACAACT
GTATTCTATA TTGGTTTGGG TACTCTCATT CTGGGTAACG GTTTATTCAA GCCAAACATC
TCCACTATGG TGGGTGATCT TTACGAAGAA GGCGATCACC GTCGTGATGG CGCATTTACC
ATTTTCTACA TGGGCATCAA CTTAGGTGCT GCCCTGTCAG GCTTTATAGT CGCCTGGGCT
TATACTAGCT TCGGACACGC TACTATCGTT GACGGACATG AAGTGTTTGT TAACAACTGG
CAAGCAGGTT TCTTCTGTGC CGGTGTTGGT ATGATTTTCT CTTTAATCAT CCAATTTTTG
TTCGCACAGA AGTATTTAGG CGATATCGGC AGAGTGCCAG CCGCTAAGCT TGAAAAGCAA
AAAGCGGAAG AGAAAGGTGA AGTACGTAAA GAACCTCTGA CCAAAGTTGA ACGTGACCGT
ATTAAAGTCA TCATGATAAT GGGTTTGTTC ACGATTATCT TCTGGGCTGG TTTCGAACAA
GCTGGCGGTT TAATGAACTT GTTTACTAAC GAGTTCACCG ATCGCATGGT CGGTAGCTTT
GAAGTTCCGA CGACTTGGTT CCAATCATTA AACGCTATTT TTATCGTATT ATTTGCACCT
GTAATTGCTT CTATCTGGAT CCGCTTAGGT AAGAATGAAC CTAACTCTCC AGTGAAATTT
GCGCTTGGTC TGTTCTTACT CGCGATCGGT TTCATATTCA TGATAGGTGC TGTAATGCAA
ATGGGTGGCG ATGCATCGGT TAAATCGAGC ATGTGGTGGT TAGTGGGCGC TTATTTCTTC
CACACTATGG GTGAACTTTG CTTATCACCT ATCGGTTTAT CTATGGTGAC TAAGTTAGCA
CCTCTGCGCA TTGCTTCTTT GATGATGGGC GCTTGGTTCC TATTCGTCGC TGCCGCCAAT
AAGATTGGCG GTGTGGTTGG CTCATTCATC GGCCATGGCG GTGAAAAGGA AGAGCAACTG
GCGAATGCAA TGGCGATCTT CTCTGGCATT GCCATTACAG CGGCACTTTC AGGTATTATT
CTGTATTTTA TGGCTGATAA ATTAGTGGAC TGGATGCATG GCGCTGAAAG CAAGCATCAG
ACTGAAGCCG AAGTCTTAGA AAGTGAAATT GCTGTAACTG CTGAGCATGA AGCAATAAAA
CGCTAA
|
|---|
| Protein sequence | MSVAKPQGTM LGHPKGLFLL FTTELWERFS YYAMRAILVL YLVDKVQSDG GHGLGWTQAE
ALSLYGTFTG LVYLTPLIGG WLADNVLGQR KAIYFGGALM AAGQFLLAAP HSWIPGLETT
VFYIGLGTLI LGNGLFKPNI STMVGDLYEE GDHRRDGAFT IFYMGINLGA ALSGFIVAWA
YTSFGHATIV DGHEVFVNNW QAGFFCAGVG MIFSLIIQFL FAQKYLGDIG RVPAAKLEKQ
KAEEKGEVRK EPLTKVERDR IKVIMIMGLF TIIFWAGFEQ AGGLMNLFTN EFTDRMVGSF
EVPTTWFQSL NAIFIVLFAP VIASIWIRLG KNEPNSPVKF ALGLFLLAIG FIFMIGAVMQ
MGGDASVKSS MWWLVGAYFF HTMGELCLSP IGLSMVTKLA PLRIASLMMG AWFLFVAAAN
KIGGVVGSFI GHGGEKEEQL ANAMAIFSGI AITAALSGII LYFMADKLVD WMHGAESKHQ
TEAEVLESEI AVTAEHEAIK R
|
|---|
| |