| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_2431 |
|---|
| Symbol | |
|---|
| ID | 4846840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 2411575 |
|---|
| End bp | 2412747 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640117139 |
|---|
| Product | aminotransferase, class V |
|---|
| Protein accession | YP_001048334 |
|---|
| Protein GI | 126180369 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
|---|
| TIGRFAM ID | [TIGR03402] cysteine desulfurase NifS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCGGA AACGGTCGGT CTACATGGAC CATGCGGCGA CGACGCCGGT GCGGCCGGAG
GTCGCCCGGG CGATGCTCCC CTACTTTTCG GAGCGGTTCG GGAACCCCTC CTCGCTCTAC
TCCCTCGCCC GCGAGGCGGA GGAGGCGGTC GAGGAGGCAC GGGGACGCGT GGCGGCCGCG
ATCGGGGCAA ACCCGGAGGA GGTCTTCTTC ACGTCGGGCG GGACGGAGGC CGACAACTGG
GCGATCAAGG GGGCGGCGGC GGCGAGCCGG AAGAAGGGCG ACCATATCGT CACCTCCGCG
ATCGAGCACC ACGCCGTCCT CCATACCTGC CGGAGCCTCG AAAAACAGGG CTACCGGGTC
ACCTACCTCC CGGTCGACGA GTTCGGGCGA GTGGAGCCGG GATCCGTCGA GGAGGCGATC
ACGGATGCGA CGATCCTCGT CTCGGTGATG GCCGCGAACA ACGAGATCGG GACGATTCAG
CCAATCAGAG CGATCGCGGA AGTCGCGCAC GACCACAAAA TCCCGTTCCA TACCGACGCC
GTCCAGGCGA TCGGGGCCTT CCCGGTGGAC GTGGACGAGA TGGGAGCCGA CCTCCTCGCC
CTCTCCGCCC ACAAGTTCGG CGGCCCGAAG GGGACGGGAG CACTCTACAT CAGAAAGAGA
ACCCACATCG GGACGTTCAT GGACGGCGGG GCGCAGGAGC GGGGGAAGCG GGCCGGAACC
GAGAACGTTC CCGGAATCGT GGGGCTCGGG CGGGCGATCG AACTCGCGGT CGCCGGGATG
CCCCGGAACG CCCCCAGGCT CGCCGCGATG CGGGATAGGC TGATCCGGGG GATCCTGGAC
GCGATCCCGG ACACCCGGTT GAACGGCCAC CCGACCGAGC GGCTGGCAAA CAACGTGAAC
GTCGCGTTCC GCTACGTCGA GGGGGAGTCG ATCCTCCTCA TGCTCGACGC CCTCGGGGTT
GCCGCCTCGA CGGGAAGCGC CTGCACCTCG GCGTCGCTCG AGCCCTCCCA CGTCCTGACC
TCGTGCGGTC TGGCGCCGGA GCACGCCCAC GGCTCGCTCC GGCTCACCCT CGGGTACGCG
AACACCGAAG AAGACGTCGA CTACGTTCTT GAGGTGCTCC CCGGGATCAT CGAGCGGCTG
CGGGCTATCT CGCCGCTCCG GGGGGAGGCG TGA
|
|---|
| Protein sequence | MERKRSVYMD HAATTPVRPE VARAMLPYFS ERFGNPSSLY SLAREAEEAV EEARGRVAAA
IGANPEEVFF TSGGTEADNW AIKGAAAASR KKGDHIVTSA IEHHAVLHTC RSLEKQGYRV
TYLPVDEFGR VEPGSVEEAI TDATILVSVM AANNEIGTIQ PIRAIAEVAH DHKIPFHTDA
VQAIGAFPVD VDEMGADLLA LSAHKFGGPK GTGALYIRKR THIGTFMDGG AQERGKRAGT
ENVPGIVGLG RAIELAVAGM PRNAPRLAAM RDRLIRGILD AIPDTRLNGH PTERLANNVN
VAFRYVEGES ILLMLDALGV AASTGSACTS ASLEPSHVLT SCGLAPEHAH GSLRLTLGYA
NTEEDVDYVL EVLPGIIERL RAISPLRGEA
|
|---|
| |