| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_2164 |
|---|
| Symbol | |
|---|
| ID | 4846568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 2158630 |
|---|
| End bp | 2160168 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640116872 |
|---|
| Product | peptidase M28 |
|---|
| Protein accession | YP_001048069 |
|---|
| Protein GI | 126180104 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2234] Predicted aminopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.502107 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCAG ATTCCTCCTC TTCCCAACTT TTTGGCCCCC TCATTGCCGG GATCCCGATC
ATCGCCGCTT TGCTCCTCCT CGGCACGACG ATACCTACCC CGGCCTGTGC CGAGGATATG
AATTCATTAA CCGAGATCAT CGGGGTGCTC ACCGACTACC AGCGGGTCCC CGGCTTCGAC
GACGGACCGG CTGCCGACTA CATCGCCGGG AGACTGGAGG AGGACGGATA TGACGTACAG
CAGGAGGTCT TTGCCGTCGA GACGGATGCG GGACCGGCCA CGACCCAGAA CGTCATCGGT
ATCAAGAAGG GCTCCGGGCC GGGGATCGTC GTCGTCTGCG CCCACTACGA TGTCTACGGT
CCCGACTGCC CCGGAGCGGA CGACAACGCC GCCGGGGTCG CCGTGATGCT TGAGGTCGCA
CGGGCGCTCC GGACGGAATC CCTGGACCGA TCGGTCTACT TCATCGCCTT CTCCGGCGAG
GAGGTCGGGC TGCAGGGGAG CGCCGACTGG CTGGACCGCC ACGCGGACCT TGCCGGGGAT
ATCATCGCGG CCGTCAACCT CGACTGCGTT GCACGCGGCG ACGAACTCCA TGTCGATACA
CTCCCCCAGT ACAGCTGGAT ACTGGACACC GTCCCCGAAT CCCCGGCGAT CAACCATCTG
ATTGGATCGA GTCTCGGGGG CGACCACTGG CGCTTCTGGG AGCACCATAT CCCCGCCGCC
CTGATAACCG ACAACAGCGG CTACACCCTG CGGCATACCC CGGACGATAC CCCCGAGACC
CTGAACCTCT CCCTGGCGGC GTCCTGCACC GAAGCGGTGA CCGGCATGGT CCGGACCCTT
GCCGCCGCAG ACGACACGAC GCCCCCGGCG GTGGAAGGGT CGGTCGAGGA GGACGGGACG
ATCCGGTACG CCGTCTCCGA ACCCGCGGTG ACGCACCTCA TCGTCGACGG GACCGACTTT
GGCGCCCTCA CATCAGGGCA GGTCACCCTC CCGCCGGGCC AGCATAGCGT CCGGGTCATT
GCCTACGATG CGGCCGGGAA CCGGGGCGTC CTGGACCTGG AGGCCGACGT GCCTGGTACC
GGCCGCGACA CCCCCGGGTC CGACCATCAG CCGGGGGGTA TCAGCATCCC CTGGAAGCGG
ACGGAAGAAG ACCGCGAGAA GTATGGAATG CAGCATTATG GCACCCCGTT TGTCTCCCTC
TCCTACGACG GCCCGCGAGA GGAAGACCCA GAGACCCGAG TCGACGGCTA CGTCGACGGT
ATCTGGATCA CCGGGCTTGA GGGGGGGCAT ACCATTATCC ATGCCTCGGG GCTCCACCGC
TACGAGGTGG CGGCGGTCGC TGGCGGGGAT GTCGTAGGGT ATGACGAGAC GACGTATCTC
GTCAGACGAT TGTATGACGA CCCTATGCGT TACTACATCC AGAACAGCGC TGTGCGGGAG
GCACAAGCCC CTGAGGACCC GCTCCCCCTG GTCCCGGTCG CGTGCACGGT CGCCGCCTCG
CTCCTCGCTG TCGGGTACCT CATCTCGCGG AGGCGGTAG
|
|---|
| Protein sequence | MAADSSSSQL FGPLIAGIPI IAALLLLGTT IPTPACAEDM NSLTEIIGVL TDYQRVPGFD
DGPAADYIAG RLEEDGYDVQ QEVFAVETDA GPATTQNVIG IKKGSGPGIV VVCAHYDVYG
PDCPGADDNA AGVAVMLEVA RALRTESLDR SVYFIAFSGE EVGLQGSADW LDRHADLAGD
IIAAVNLDCV ARGDELHVDT LPQYSWILDT VPESPAINHL IGSSLGGDHW RFWEHHIPAA
LITDNSGYTL RHTPDDTPET LNLSLAASCT EAVTGMVRTL AAADDTTPPA VEGSVEEDGT
IRYAVSEPAV THLIVDGTDF GALTSGQVTL PPGQHSVRVI AYDAAGNRGV LDLEADVPGT
GRDTPGSDHQ PGGISIPWKR TEEDREKYGM QHYGTPFVSL SYDGPREEDP ETRVDGYVDG
IWITGLEGGH TIIHASGLHR YEVAAVAGGD VVGYDETTYL VRRLYDDPMR YYIQNSAVRE
AQAPEDPLPL VPVACTVAAS LLAVGYLISR RR
|
|---|
| |