Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1499 |
Symbol | |
ID | 4846272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 1499431 |
End bp | 1502580 |
Gene Length | 3150 bp |
Protein Length | 1049 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640116191 |
Product | ATP-dependent nuclease subunit B-like protein |
Protein accession | YP_001047410 |
Protein GI | 126179445 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3857] ATP-dependent nuclease, subunit B |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCCCCG CCGTTCTGTA CCGCCAGTTG CCCGGAGAAG GTCTCGACGC GTTCATCGCG GAGTTCCGGA AAGCCGCCGC CCGCGACCCG TTCGGCACCG TCTTCATCGT CCCGACCTCT CACCTTGCCC GGGAGATCGT CCGCCGCCTC GGGGAAGAAG GCGTCCCGGT CGTCGCCGAT GCGGTCACGA CCCTTCCCGG GTTCGCCCGG AAGGTCTTTC TCGACTATGC GACGTCGGAG ACGCTGATCT CCGGGGCCGA ATCCCGGCTC GTCCTCGCCC GCATCCTCGC CGCCGGCAGG TACCCGCTTC TTTGCACCGG GGCGGTCGAC GACCTCGCGA CCCTTTTTGA TGTCATCCTC ATGCGGAAGG TCGATTACCC GGCCGCCCTC GGCGATCTCG CGACCGCCAA AAGCATCGAG ATCGCCCGTC TCTTCGATGC CTACCGCCGG TTCCTCGACG AGCACGACCT CGTCGACGAG AGCACGCTCT TTGCCCGTAC GGTTCGGCTG CTCGCCGATA CGGGCTGGTT CCGGACGGTC TACATCTACG GTCTCTTCGG GCCGATGCCG CGGGCGGGCG GCAGCCATTA TGCCCGACCC CCCCGAACGG TCTTCGTCTA TGGCCTCTTC GAGCCGATGC CGCTCGAACG CGACCTTCTT TTCTCTCTGC GGGAGTCTGC GGAGGAGTTT CACTACTCGA TCCCCTACAC CGGAAATCCG GCGATCTTTA CCGACGACGG CGAGTGGCTG CACCCGGATG CGGTCATATC CGGGGATGCG CCGGACACCC GCCGCTCACG CCTCGCCGCC CTCTTCTCCC GGTCTGAGCC CGTTGACTGC TGCGGGTTCG TCCGTCTCGC AGAGCGGCGT GACCGGGAGG GCGAGGTCCG GGCGATAGCG CAGGAGATCC GCGATCTGGT CGCCGCCGGC GTGCGGCCGG ACGAGATCGC GGTCGCGTTC CCCGACTTCG CATCAGCGCT GCCTTACGTG GAGGAGGTCT TCCCCGACTT CGGGGTTCCG TACGCCGCGT CCGATGGCCG GGCGCTCTCC GCATCGCCGC TTGTCCGGGC GCTGCTCGAC GTCGCTATGG TTCCCGCCCG CGGTTACCGG CGGGAGGACG TCGTCGCTCT CGCGACCTCC CCCTACCTGC CGTTCACCGG CGGCTGCGAG CTCGACATCT TCTCCCGGGA GGCCCGGATA ACCGCCGGGA ATTGGGACGA GCGGCTCGCC GCGCTCGCCC GCGCTGCCGG TGAGGAGCGA GGACGGCCGG ACACCCCGGA ATCGGCAAAG TCCCGGCTCG CCGAAAAGGT CGCCGCCATC GAGTCGGCAC GGAAGACCGT CCGGGAGCTC TTCGCCGATC TCTCGGCGCT CGAAGCGACG AAGACGCTTG CCGGCCATAT CGCCGCCTAC CGATCCGTCC TCGAGCGGTG GCAGGCTCCG GCCATGCCGG AGGACGGCGA TCCCGATCTC CTCGAGGACG AAGCACGGAA TCTCGGGGGG TTCTCCGGCA TCCTCGCGGC GCTCGAACGC CTCGCCCGGC TGCTGCCGGA CGAGAAGATG TCCCTTGCGG AGTTCTCCTC CCTGCTCGCG CAGGTTGCCG CCGGAACCCG GACAGGCCGT CGGCGGAGCA ACGGCGGCGT CCGGGTGGTC GGCGTCCGGG AGGTTGCGCA CCTCGCCGTC CCCTACCTCT TCGTCGGGGG TCTCGTCGAG GGTACGATGC CGCGGCTGAC CACCCGGCTC CCGTTCACCA CCGACGCCGA GACCCGGCGC CTTGGAACCC GGTCGAGAGA GGATATCCTC CGGGAGGAGC GGTATTACTT CACCGCCGCC CTGCTCTCCG CCCGCACCCG GGTCTACCTG AGTTATCCCG CGGCCGAAGG AGCAACGCCG CTGGTGCACT CCGGCTTCGT GGACGCCGTT CGCGAAGCGT TCTCCCCGGA GACGTGGGGG AGCAATGATT TCCCGGACTC CGGGCTCGCT GCAGCCCGGC GGGCCGGGGC CCTCCTCGCC CGCGGGGAGT TCCCCGTCGG GATGCCGTGC CCCATCCCCG TCCGCGAGGC CGTCCGCCGG CTCAACATCG AGAACTACCA CCGGAAAGCC GGCTACGACT CTCCCTACGA CGGCATGCTC GATGACGACC CGGCGATCCT CGCGGCGCTC GCCGAACGGT TCGGCGAGGG GGCGGTCTTC TCCCCGACGG CGCTCGAGAC CTACGCCGAC TGTCCGTTCC GGTTCTACCT GGAGCGGGTT CTCGGTCTTG CGCCGCTGCC CGAGGCGGAT CCCGACCTGA CGGCACAGGA GCGGGGGAGC CTCGTCCACC GGATCGCCTA CCGGTTCTAC TCCGGCTGGA CGTGCGACGG CAACGGCCCG GTCACCGGGG CGTGCTACGC GGACGCCCTC CGACGGATCC TCGACGCCGG CCGGGAGGAG GCGGACCGGT TTACGTTCGA GACCCCGGCA TGGGCCGCGG ATAAAGAGCA TCTTCTCGGG TCGCCTGCGG CGGGAAAGGG GGTGCTCGAG CGGTTCCTCC GGCACGAGGC CGAAGTCGCG GCCTCCCGCT TCGTCCCGCA CGCCTTCGAG GTCTCGTTCG GCCTCCCGCT GGTGCCGGGG GAGGTCGACG CGGTATCGAT ACCCGACGCG GTCGCGATCC CGCTCGGCGA GGAGACCATC CGCCTGCGGG GCAGGGTCGA CCGGGTCGAC GTGCTGACCG ATGGGCGGTT CATGATCACC GACTACAAGA CCGGGTCCTC GCATCCCCGG CTCAGGGATA TCGAGGCCGG AAAAGCGCTC CAGCTCCCCC TCTACCTCCG GGCGGTCGAG ACCCTGACCG GGAGGGAGGG GGTCGCGGGC ACCTACTACA TCCTCCGGCG CGGTGAAGTC ACGAACAAAC CGGTCTTCTG GGACGCGGGG CTAAAGGACT GCTTCTCCTG CTTCCCCGGC TCGCAACGGA GCAGCGTCGA GGATGTCCGC GAGGTGGTAA AGACCGCTCT CTTCTGGACG AAGCGCTACC TCGCCGGGAT ACGCGGCGGG CGCTTCCCGC CCCGGTCGGA CGCCGGCCCC TGCCCGGCGT ACTGCGGGTT CAAGACCGTC TGCCGGTTCG ACGCCCTGCG GCTGCTCAAC GCGGAGGTGA TGCCCGATGG GACTGACTGA
|
Protein sequence | MSPAVLYRQL PGEGLDAFIA EFRKAAARDP FGTVFIVPTS HLAREIVRRL GEEGVPVVAD AVTTLPGFAR KVFLDYATSE TLISGAESRL VLARILAAGR YPLLCTGAVD DLATLFDVIL MRKVDYPAAL GDLATAKSIE IARLFDAYRR FLDEHDLVDE STLFARTVRL LADTGWFRTV YIYGLFGPMP RAGGSHYARP PRTVFVYGLF EPMPLERDLL FSLRESAEEF HYSIPYTGNP AIFTDDGEWL HPDAVISGDA PDTRRSRLAA LFSRSEPVDC CGFVRLAERR DREGEVRAIA QEIRDLVAAG VRPDEIAVAF PDFASALPYV EEVFPDFGVP YAASDGRALS ASPLVRALLD VAMVPARGYR REDVVALATS PYLPFTGGCE LDIFSREARI TAGNWDERLA ALARAAGEER GRPDTPESAK SRLAEKVAAI ESARKTVREL FADLSALEAT KTLAGHIAAY RSVLERWQAP AMPEDGDPDL LEDEARNLGG FSGILAALER LARLLPDEKM SLAEFSSLLA QVAAGTRTGR RRSNGGVRVV GVREVAHLAV PYLFVGGLVE GTMPRLTTRL PFTTDAETRR LGTRSREDIL REERYYFTAA LLSARTRVYL SYPAAEGATP LVHSGFVDAV REAFSPETWG SNDFPDSGLA AARRAGALLA RGEFPVGMPC PIPVREAVRR LNIENYHRKA GYDSPYDGML DDDPAILAAL AERFGEGAVF SPTALETYAD CPFRFYLERV LGLAPLPEAD PDLTAQERGS LVHRIAYRFY SGWTCDGNGP VTGACYADAL RRILDAGREE ADRFTFETPA WAADKEHLLG SPAAGKGVLE RFLRHEAEVA ASRFVPHAFE VSFGLPLVPG EVDAVSIPDA VAIPLGEETI RLRGRVDRVD VLTDGRFMIT DYKTGSSHPR LRDIEAGKAL QLPLYLRAVE TLTGREGVAG TYYILRRGEV TNKPVFWDAG LKDCFSCFPG SQRSSVEDVR EVVKTALFWT KRYLAGIRGG RFPPRSDAGP CPAYCGFKTV CRFDALRLLN AEVMPDGTD
|
| |