Gene Rsph17029_2765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2765 
Symbol 
ID4897046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2908324 
End bp2909556 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content75% 
IMG OID640113367 
ProductFmu (Sun) domain-containing protein 
Protein accessionYP_001044639 
Protein GI126463525 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGACG AGGCGCGGGG CATGGCGGTG ACTCTGCTCG ATGCCGTGCT GGGCGAGGGC 
AAGCTCCTGT CGCAGGCGCT GGCGGATCTG CCCGGGACGG CGGCTCCGGC CGAGCGGGCG
CGGGCGCAGC GGCTCGCCTC CTCGGTCCTG CGCCATCTGG GCCCGGCCGA CCGGCTGCTC
GCGCCGCATC TGCGCAAGGC GCCCCCGCTC ACGGTGCGCA ACATCCTGCG GCTCGCCACG
GTCGAGATGG CCGCCGACGG CGCCGCGCCG CACGGCGTGG TGAGTTCGGC CGTGGATCTC
GCGCGGCGCG GACGGCGCAC GCAGCATCTG GCGGGGCTGG TCAATGCGGT CCTGCGCCGG
ATCGCGCCCG CCTCCTTCGC GGGCCTGCCC GCACAGCATC TGCCGATGTG GCTGCGCCAG
CCGCTCGTGC GCCGCTGGGG CCGGGCCGTG GTCACGGCCA TCGAGGCGGT GCAGGCCGCG
CCGCCGCCGC TCGATCTGAC GGCGCGGCCG GGCCTCTCCG CCCCGGGCGA ACCGCTGCCC
ACCGGCAGCT TCCGTCTGCG CGCGCCGGGA CAGGTCTCGG CACTGCCCGG CTATGAGGCG
GGCGAGTGGT GGGTGCAGGA TGCGGCGGCG GCCCTCGCGG TGAAGCTCCT CGATCCGCAG
CCGGGCGAGT CTGTGGCCGA TCTCTGCGCG GCGCCCGGCG GCAAGACGCT CCAGCTCGCC
GCGGCGGGCG CGCGCGTCAC GGCGCTCGAC ATTTCCGAGG CCCGCCTCGG GCGGCTCCGA
GAGAATCTCG CGCGGACGGG CCTGCAGGCC GAGGTGGTGG CGGCCGATCT CCTGACCTGG
CAGGGCGGGC CCTTCGAGGC CATCCTGCTC GATGCACCCT GTTCGGCCAC GGGCACCATC
CGCCGCCATC CCGATCTGCC CTTCGTGAAG GACGGCAGCG AGCTTCCTGG CCTCGTCGCG
CTGCAGGCGG CGATGCTCGA CCACGCGCTG GGCCTGCTCG CGCCCGGCGG GCGGCTCGTC
TTCTGCACCT GCTCGCTCCT CGAGGAAGAG GGCGAGGCGC AGCTCGCGGC GCTTCTCGAG
CGCCATCCGG AGCTCACGGT CGAGCGGCCC ACCCTGCCGG GGGTCGAGCC CGACTGGATC
GGCGCGGAAG GAGGGCTCCG CCTTCGCCCC GACTTCTGGG CCGAGGCGGG GGGCATGGAC
GGATTCTTCA TGGCGCGGGT GCGCAGACCA TGA
 
Protein sequence
MADEARGMAV TLLDAVLGEG KLLSQALADL PGTAAPAERA RAQRLASSVL RHLGPADRLL 
APHLRKAPPL TVRNILRLAT VEMAADGAAP HGVVSSAVDL ARRGRRTQHL AGLVNAVLRR
IAPASFAGLP AQHLPMWLRQ PLVRRWGRAV VTAIEAVQAA PPPLDLTARP GLSAPGEPLP
TGSFRLRAPG QVSALPGYEA GEWWVQDAAA ALAVKLLDPQ PGESVADLCA APGGKTLQLA
AAGARVTALD ISEARLGRLR ENLARTGLQA EVVAADLLTW QGGPFEAILL DAPCSATGTI
RRHPDLPFVK DGSELPGLVA LQAAMLDHAL GLLAPGGRLV FCTCSLLEEE GEAQLAALLE
RHPELTVERP TLPGVEPDWI GAEGGLRLRP DFWAEAGGMD GFFMARVRRP