| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0598 |
|---|
| Symbol | |
|---|
| ID | 4897205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | - |
|---|
| Start bp | 622811 |
|---|
| End bp | 623548 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640111184 |
|---|
| Product | Triose-phosphate isomerase |
|---|
| Protein accession | YP_001042486 |
|---|
| Protein GI | 126461372 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0149] Triosephosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.441113 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAAAC TTGCGGCCGG AAACTGGAAG ATGAACGGAA CCGAGGCGGA TCTGGGCGAG
ATCGACGCCC TGCTTGCCGC GCATCCGGCG CCCCGCTGCG AGATGCTGAT CTGTCCGCCC
GCAACGCTTG TTGCGCGCAT GGCGGGACGC GCGGCGCAGG GCCTGATGGT CGGCGGGCAG
GACTGCCACC CCAAGACCTC CGGCGCCCAT ACCGGCGACG TCTCGGCCGC CATGCTCGCC
GATGCCGGGG CGAGCCACGT CATTCTCGGC CATTCCGAAC GCCGCGCCGA TCATGGCGAG
ACGGACTCGC TCGTGCGGCT GAAGGCCGAA GCGGCCTGGG GCGCGGGCCT TGTCGCCATC
GTCTGCGTGG GCGAAACCGA GGCCCAGCGC GACGCGGGCC AGACGCTCGA CGTGATCGGG
GCACAGCTTG CGGGCTCGGT GCCGGAAGCC GCCACCGCGG CCAACACCGT GATCGCCTAC
GAGCCGGTCT GGGCCATCGG CACCGGCCGC ACGCCCACGA CCGCCGAGAT CGCCGAGGTT
CACGCCTTCC TCCGCGCGCG GCTCGCCGAG CGGTTTTCGG ATGCGGAGGG CTTCCGACTG
CTCTACGGCG GCTCGGTGAA GCCGTCGAAT GCGGCCGAGA TCTTCGCCGT GCCGAATGTC
GATGGCGCGC TGGTCGGCGG CGCGAGCCTC AAGGCCGCGG ATTTCGGCGG GATCGTGGAG
GCCCTTTCGG CCGCCTGA
|
|---|
| Protein sequence | MRKLAAGNWK MNGTEADLGE IDALLAAHPA PRCEMLICPP ATLVARMAGR AAQGLMVGGQ
DCHPKTSGAH TGDVSAAMLA DAGASHVILG HSERRADHGE TDSLVRLKAE AAWGAGLVAI
VCVGETEAQR DAGQTLDVIG AQLAGSVPEA ATAANTVIAY EPVWAIGTGR TPTTAEIAEV
HAFLRARLAE RFSDAEGFRL LYGGSVKPSN AAEIFAVPNV DGALVGGASL KAADFGGIVE
ALSAA
|
|---|
| |