Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_50504 |
Symbol | |
ID | 4840888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | - |
Start bp | 274077 |
End bp | 275393 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 12 |
GC content | 38% |
IMG OID | 640392203 |
Product | predicted protein |
Protein accession | XP_001386647 |
Protein GI | 150866900 |
COG category | [S] Function unknown |
COG ID | [COG1723] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0295961 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCTT CAGGTAGTGC TCGAACGCCA CTCTTAACAA AACCTTCCTA TGAGAATCCT ATTATATTAC CTGACAGTGT CCTAAAGACT ACTGGAATAC CGTCTAATTC CAAGCTCAGT CAATCGCAAC ATGGACAGCA AAGTCAACAG GCTAATCGTT CGGCATCCAA GATTGCGCAA TCACCAAAGA TAGGGTTGCA AAGAACGAGT AGAACAACGC AAAAGCTTAA ATTATTGCCT GAAGACCCTC CAAATTTGGA ACATGCAACA GCGAGTATAA GTGCAAATGA CGATGATGAT GACTTGCCTA CAACAAGAGT TTATTCTCAA GTTAAGCGTA TAACGGATAC ATCTGCCAGA AAGGATGCAG AAATATTGGG AAAGCTGCAC AGAGACTTGC TTCCAAGAGT CACTGCTTAT TGTACTTGTG GCTCTTATAA AATGAAAGAT CTTCTTCGTT GGCTCAAGGA CAGAAAGAGA ATACACAATA CCAGTCCAAA ACTATTTGAT GAATGTCTCT ACTCTCCATT CACATACAAA GATTGGAGAA GTGATAGCAA TGGAGGTGAA GATAATGACT CTCATAAACT CATTAGGTTG GCTGATGAAG GTGGTGAAAT AGACATCGGT CGGAAGAATG ATATATTTAT TTTTGAGTAT GGAGTAGTGG TCATGTGGGG ATATTCCACG AAAGAAGAAG CTGCATTTTT AGAGGACTTA GCAAAGTTTG AAAGTGAGAA GCTTTCTTCT GAGGACATTC AAATAGAAGA ATTCAACTAC TATATTACAA AGTCCTACCA ACCGAGAATC TATAATGATT TTATTACATT AAGAGATGAT AATAATTATA TGTTAAAATT GTCAATTTCT CATGCATTGG CTCAATCAGT TAAGATTTCT TTGTTTGAAG AATTGGTTGA CAACACAATT GAAGATACTC AGGATATCCC TCAACAGATT GCACATACTG GTAAGGTCGC AATGACAAGG GACGAAATAA TGAAGTCCAT TGGTGAATTG TTTATCTTGA GAATCAATAT TAATTTGCAT GGTTCTGTTC TTGATTCTCC CGAGCTCATG TGGGCTGAAC CTCATTTGGA GCCTATTTAT CAAGCAACGC GAGGCTATTT AGAAATCAAT CAAAGAGTGG AATTATTGAA TCAGAGACTT GAAGTTATCT CGGACCTTTT GCAAATGTTA AAAGAACAAC TTGGTCATTC TCACGAAGAA AATCTAGAGT TCATTGTTGT CGTACTCGTT GGTGTAGAAG TCTTGGTCAG CGTCATAAAT ATTATTATTG ATATTCTAAC GTATTAG
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Protein sequence | MTSSGSARTP LLTKPSYENP IILPDSVLKT TGIPSNSKLS QSQHGQQSQQ ANRSASKIAQ SPKIGLQRTS RTTQKLKLLP EDPPNLEHAT ASISANDDDD DLPTTRVYSQ VKRITDTSAR KDAEILGKSH RDLLPRVTAY CTCGSYKMKD LLRWLKDRKR IHNTSPKLFD ECLYSPFTYK DWRSDSNGGE DNDSHKLIRL ADEGGEIDIG RKNDIFIFEY GVVVMWGYST KEEAAFLEDL AKFESEKLSS EDIQIEEFNY YITKSYQPRI YNDFITLRDD NNYMLKLSIS HALAQSVKIS LFEELVDNTI EDTQDIPQQI AHTGKVAMTR DEIMKSIGEL FILRININLH GSVLDSPELM WAEPHLEPIY QATRGYLEIN QRVELLNQRL EVISDLLQML KEQLGHSHEE NLEFIVVVLV GVEVLVSVIN IIIDILTY
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