| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_63206 |
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| Symbol | DPOD |
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| ID | 4840775 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | + |
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| Start bp | 240792 |
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| End bp | 244040 |
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| Gene Length | 3249 bp |
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| Protein Length | 1070 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640392090 |
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| Product | DNA polymerase delta catalytic subunit (DNA polymerase III) |
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| Protein accession | XP_001386065 |
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| Protein GI | 150866455 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
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| TIGRFAM ID | [TIGR00592] DNA polymerase (pol2) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.442314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACAAC CGAAAAGGCC GTATAATGAA TTTCATCAAG AGCAGGCACA TTCACTACCC
GTTGCTTCGC AGTCAATCTC ATCCTCCCAG GTGGAGCTCA CTACGTCCCA ACAGCAATTA
CTAAAGAAGG TAAGGCGTCC AAATGGTGGG GAAGAACCTT CGGAGTTCGA AAGAGAGTTA
TTGGATATGA CACAATCAGC GAAAGAGATC GAACACGAAG AGGATCAGAA ATGGGGAAGG
CCTCCTTTGC CTGAAACATT TGACCCAACT ATTGATGATG TTTCGTTTCA GCAATTGGAT
GCAGAAGAAT TTCAAATAGG AGATTACACT ATAGCTAGAT ATTTTGGCAT CACGGAAGAG
GGCCATTCAG TGTTGTGCAA CGTTACTGGA TTTGTTCACT ATTTCTATGT CCCCGTTCCA
AAAGGATTTT ATAAAGACCA ACACCTCGAT CAATTTTCTA GCTACCTCAG AGCAAACTAC
GAAGGAGTTG AAAACATAGA ATTAGCCTTG AAAGAGTCAA TTTGGGGCTA CAATAAAAGT
GTTAAGACTC CTTTCTTCAA ATTTTTTATT AACAACACCA AAAATATTAC CAAGTTGAGG
TCAGCTTTTG AGAGAGGCGA AATTAGATTT GAAAACCTCT TCCCTCCTCA AAATGTTTCG
TACGATAACA TTAACTACCT TTTGAGACTA ATGATCGACT GTAAGGTGAC TGGTATGTCC
TGGGTTACAT TACCAAAAGG TAAATTTTCG TTGGTACACA GCAACGACAA GGTTTCCACC
TGTCAAATCG AATGCTCGAT CAATTACAAG GACTTGATTT CACACCCTTC AGAAGGGGAG
TGGTTGAAAA TGGCTCCACT TAGAATCCTT TCATTTGATA TTGAGTGCGC AGGTAGAAAA
GGTATTTTTC CGGAAGCTGA ACATGATCCT GTTATCCAGA TTGCAAACGT TGTTCTGAAA
CATGGTGAAT CTAGACCATT TGTAAGAAAT GTTTTCACCG TGAATACCTG TTCTCCTATA
ATCGGTTCCC AAATCTTTGA ACACGAGAAA GAAGAAGACA TGCTAATGAA TTGGAAAGAT
TTTGTTGTAC TGGTCGATGC TGATGTCATT ATTGGTTATA ATACCGCCAA TTTCGATATT
CCATATCTCT TGGATAGGGC AAAAGCGCTA GGCTTGAGAA ACTTTCCTTT CTTTAGCAGG
TTGAAAAATC TGAAGCAGGA GGCTAAAGAT TCCGTCTTCA GTTCTCGAGC ATACGGTACA
AGAGAGAACA AAGTTGTTAA TATCGATGGA AGAATGCAAT TGGATTTATT GCAATTCATT
CAGCGTGAAT ACAAATTGAG ATCGTACACC TTAAATTCTG TTTCTGCACA TTTCCTTGGC
GAGCAGAAAG AGGATGTTCA ACACTCGATT ATTACCGACC TTCAGAATGG TACCAGTGAA
ACAAGAAGGC GTTTGGCTGT TTATTGTTTG AAGGATGCTT ACTTGCCTTT AAGGTTGTTA
GACAAGTTGA TGTGTCTTGT CAACTATACC GAAATGGCTA GAGTTACAGG AGTACCCTTT
TCCTATTTGC TTGCAAGAGG CCAGCAGATT AAAGTCATAT CTCAACTTTT TAGGAAGTGC
TTGGAGGAAG ACATCGTCAT CCCTAATATG AAAAGTGAAG GAACCAATGA AGAATACGAA
GGCGCAACAG TTATCGAGCC CAGTAGGGGC TACTATGACG TTCCCATAGC TACTCTTGAT
TTCAGTTCGT TGTATCCTTC TATAATGATG GCACACAATT TGTGCTACAC TACCTTATTG
AACATTCAAA CTATCAAAGC ATTTAATTTA ACCGAAGATG ACTATACACG AACTCCAAAC
GGAGATTACT TCGTCAAGGA TCATAAGAAA CAGGGTATTT TGCCAACTAT TTTAAATGAA
TTGTTAACTG CCAGAAAGAA AGCGAAGGCT GATCTCAAGA AAGAAACCGA CCCATTTAAA
AGAGATGTAC TCAATGGTAG ACAATTGGCT CTTAAAATTT CAGCCAATTC TGTCTACGGT
TTTACGGGCG CAACTATAGG TAAATTACCT TGTTTAGCGA TTTCTTCTTC AGTCACAGCC
TTTGGAAGAG AAATGATAGA GAAAACAAAA AATGAAGTTC AGGAATTTTA TTCCAAGAAG
AATGGTTACC CATATGATGC GCAAGTCATT TACGGTGATA CCGATTCTGT TATGGTGAAA
TTTGGTTACC AGGATTTAGA AACATGCATG AAGTTGGGTG AAGAAGCCGC TAACTACGTT
TCTACTAAAT TCAAGAAGCC CATCAAATTG GAATTCGAGA AGGTCTACTT TCCTTATTTG
TTGATTAACA AGAAGAGATA CGCTGGTTTA TATTGGACGC GCCCTGATAA ATTTGATAAG
ATGGATACCA AAGGTATAGA AACAGTCAGA AGAGATAATT GCAGACTTGT TCAAAATGTT
ATCACTAAGG TATTAGAATT CATTTTAGAA GACAGAGACG TGGAGAAAGC CCAACGTTTT
GTTAAACAAA CTATTGCCGA CTTATTGCAG AATAGAGTAG ATTTGTCTCA ATTGGTTATT
ACCAAAGCAT ATGCCAAACA TGACTATGCT GCAAAACAGG CACATGTTGA ATTAGCAGAA
AGAATGAAGA AGAGAGATGC AGGTTCAGCA CCAACTCTTG GTGATAGAGT TGCATATGTT
ATTATTAAGG GCTCAGGAAG CGACAAAAAC TACGAAAAAT CTGAAGATCC ATTATACGTT
TTGGAGAATT CGTTACCGAT TGATGTGAAG TACTACTTGG ACAATCAGTT AACCAAGCCT
CTTGAGAGAA TTTTTAATCC AATTTTAGGG GATGCTAAGA CTAAAGAATT ATTAGCGGGA
TCTCACACCA GAACGATTAA GATGTCTGCT CCGAAAACTG GTGCATTGAT GAGATTTGCA
AAAAAGTCGG AGGTCTGCGT CAATTGCAAA ACACCTCTCA GATCAGACAA CCATGGCGCA
TTATGCCCAA ACTGTATAAG AGAAGGAAAG GGTCCAACTT TGTACGGAAA TGCGTTGTCC
CAAATGAACT ATTTGGAGAA CAAATTTTCC AGATTGTGGA CTGAATGTCA AAGGTGTCAA
GGGTCCTTGC ACCAAGAAGT TTTGTGTTCG AACAATGATT GTCCGATCTT TTACATGAGA
AAGAAAGCTC AAAAAGATGT TCATCAACAG TCAATGGAAC TTGTGAAGTG GGAGAATACA
GTTTGGTGA
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| Protein sequence | MSQPKRPYNE FHQEQAHSLP LTTSQQQLLK KVRRPNGGEE PSEFERELLD MTQSAKEIEH
EEDQKWGRPP LPETFDPTID DVSFQQLDAE EFQIGDYTIA RYFGITEEGH SVLCNVTGFV
HYFYVPVPKG FYKDQHLDQF SSYLRANYEG VENIELALKE SIWGYNKSVK TPFFKFFINN
TKNITKLRSA FERGEIRFEN LFPPQNVSYD NINYLLRLMI DCKVTGMSWV TLPKGKFSLV
HSNDKVSTCQ IECSINYKDL ISHPSEGEWL KMAPLRILSF DIECAGRKGI FPEAEHDPVI
QIANVVSKHG ESRPFVRNVF TVNTCSPIIG SQIFEHEKEE DMLMNWKDFV VSVDADVIIG
YNTANFDIPY LLDRAKALGL RNFPFFSRLK NSKQEAKDSV FSSRAYGTRE NKVVNIDGRM
QLDLLQFIQR EYKLRSYTLN SVSAHFLGEQ KEDVQHSIIT DLQNGTSETR RRLAVYCLKD
AYLPLRLLDK LMCLVNYTEM ARVTGVPFSY LLARGQQIKV ISQLFRKCLE EDIVIPNMKS
EGTNEEYEGA TVIEPSRGYY DVPIATLDFS SLYPSIMMAH NLCYTTLLNI QTIKAFNLTE
DDYTRTPNGD YFVKDHKKQG ILPTILNELL TARKKAKADL KKETDPFKRD VLNGRQLALK
ISANSVYGFT GATIGKLPCL AISSSVTAFG REMIEKTKNE VQEFYSKKNG YPYDAQVIYG
DTDSVMVKFG YQDLETCMKL GEEAANYVST KFKKPIKLEF EKVYFPYLLI NKKRYAGLYW
TRPDKFDKMD TKGIETVRRD NCRLVQNVIT KVLEFILEDR DVEKAQRFVK QTIADLLQNR
VDLSQLVITK AYAKHDYAAK QAHVELAERM KKRDAGSAPT LGDRVAYVII KGSGSDKNYE
KSEDPLYVLE NSLPIDVKYY LDNQLTKPLE RIFNPILGDA KTKELLAGSH TRTIKMSAPK
TGALMRFAKK SEVCVNCKTP LRSDNHGALC PNCIREGKGP TLYGNALSQM NYLENKFSRL
WTECQRCQGS LHQEVLCSNN DCPIFYMRKK AQKDVHQQSM ELVKWENTVW
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