| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_17702 |
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| Symbol | |
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| ID | 4839524 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 1396779 |
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| End bp | 1398056 |
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| Gene Length | 1278 bp |
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| Protein Length | 411 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640390839 |
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| Product | predicted protein |
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| Protein accession | XP_001384956 |
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| Protein GI | 150865646 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.257016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCATCTG GAAATACCTT CTGTGGAACT TTGGTGGAAT TTCCTGGAAT CGGAATTGAC
AAGTTCGGCT CCGAATGTCA AATCTACTTG TTAACCCACC ATCATGCTGA CCACACAGTG
GGTTTGGCAA ACAAGTCATT TTGTAGACGT GTTTATTGTA GTCAAATGAC GAAAGATTTG
ATATCCCAAA GTCAGCAGTT TGAAGATAGT TTGCGATATC TAGTTCCTAA ACAATATAAT
GAACCGTTTG TGTTAACGGT CAGCGATGAA GAGGTCACTA TAACATTGAT TCCTTCATAT
CATTGTCCCG GGTCTACCAT GTTCTTAATA GAGAATAGAA GGGCTTCTGT ACTATTTACT
GGAGATATCA GGGCAGAGAC ATGGTGGGTC AACTCTTTGG CCAAGAGTCC CTTTCTCTTC
CCCTATACCA TTGGTGCGAA AGTACTAGAT CAACTATATA TAGACACTAC ATTTTCCTAT
AGGGGAGAAC CGTATGTTGA GATACCAGAG AACAACGAGG GTATCAAAGT TATCATTGAA
ATGCTAAAGA ATTTTCCCAT CAACGACCCG GAAATCCAGT TCTGTTTCAT GGATAGCACA
TCTGGATTTG AAGAGGCTTG GGTGCAAATT ATCAGTTCCA TTGAGGGCAG CTTATCATTG
AGCGCCGATT TACGTAGAAG AATCGAACTC ATTGCGTCAG AAGGTACTTA CAACTATGGG
AATGCTTGCA GAAAGCTTTT AGGAAAAGTT TGTAATGGTC CTATCTTTCA TGTTTTGAGC
AAACCGGACG ACGCATATGA GGTGAAGAAC TGCAAAATAC TTGTGAAGAT CTACCAGTGC
ATAAACTTTA ACATAGTCGA TTTCTTAGGA ACAAGCATGC CCATACCATT GAGTTCTGTT
GATAGGTCTC TTTTCAAAAG TATTGAAACT ACAAAAATGG GAAATAAACT TTGCATGTAC
GGCAATAGAA AGTGGATACT ACCAAAAGAT GGCAAAGAGC TTCTTCCACT AGACCTCAGA
CTTATATTCT CACGACACTC CTCATACACT GAAACATTAC AGTTTACATC ATTATTCCGA
CCGAAGCTGG TGTTTCCATG TACTGAATCC AAACAAACAT GGTTAGGAGG TTTCAGTTGC
GAAAGGATCT TTGGACAGTT GTGTCAAAAT CCTGAAGGTG AACATCCGTA TGACATTCGA
ATGTTCAAGC GATATGGACG ACCAGTTCTA TCTGCTGAAG CTGGTGTTCC CACTATCAAC
AGATGGAATT TGAACGAA
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| Protein sequence | MASGNTFCGT LVEFPGIGID KFGSECQIYL LTHHHADHTV GLANKSFCRR VYCSQMTKDL
ISQSQQFEDS LRYLVPKQYN EPFVLTVSDE EVTITLIPSY HCPGSTMFLI ENRRASVLFT
GDIRAETWWV NSLAKSPFLF PYTIGAKVLD QLYIDTTFSY RGEPYVEIPE NNEGIKVIIE
MLKNFPINDP EIQFCFMDST SGFEEAWVQI ISSIEGSLSL SADLRRRIEL IASEVCNGPI
FHVLSKPDDA YEVKNCKILV KIYQCINFNI VDFLGTSMPI PLSSVDRSLF KSIETTKMGN
KLCMYGNRKW ILPKDGKELL PLDLRLIFSR HSSYTETLQF TSLFRPKSVF PCTESKQTWL
GGFSCERIFG QLCQNPEGEH PYDIRMFKRY GRPVLSAEAG VPTINRWNLN E
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