| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_31573 |
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| Symbol | GIT1 |
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| ID | 4838533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 1146582 |
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| End bp | 1148108 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640389848 |
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| Product | permease involved in the uptake of glycerophosphoinositol (GroPIns) |
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| Protein accession | XP_001384520 |
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| Protein GI | 126135992 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCG ACGATCTCAG AGACAACAAA AATACTTCAA TTGTCAAGCA AGACTACATC
GAGACTACTG AAATCCCTCA GCATGATGGA AAGCGTTTCA AGTACGATGC TGATTTGAGA
AGGCAAAGAT TGGCCGGTGG TGCCAAGTTG AAAGATGTCT TGATGATTCT TTGTGCTGGT
TTCGCTTTGA TCTCAGATGG TTATCAAAAT AACGTCATGT CCATGTTGAA CAAGGTATTC
GCTATTGAAT ACCCCAAAGA ATATACCGCA TCTATGTCTA CTAGTGTCTC TAACGCATCT
CTTGTCGGTA CTATTCTTGG ACAGGTTGCC ATCGGTCTTA CCTGTGACTA CCTCGGTAGA
AAGTGGTCCA TTATTACTGC CACACTCTTC TTGATTCTCG GTACTGTTTT GTGTGCTGCT
GCTCATGGTG CTACTGTCAA CGGTATGTTC TGGATGTTGA TCATCTGTAG AGGTGTCACT
GGTTTCGGAA TTGGTGCTGA ATACCCATCT TCATCTGTTA CTGCTTCCGA AGCTGCCAAT
GAATCTGTTA GGAGAAGAGG TGGTGCCTTC ATCTTGTGTA CCAACTTGCC ACTTTCCTTC
GGAGGTCCAT TTGCATTGAT CATTTTCTTG ATTGTCCACA AGATCACAGG AAAGCACTAT
GAAGGTCTCT GGAGAACCAT GTTTGCCATT GGAGCCTTCT GGCCCTTGTC TATTTTCTAC
TTCAGATTGA AGATGTCTAC CTCTGTGTTG TACAAGAAGT CCGCCATCAA GCAAGTTGCT
CCATACTGGT TGGCTATTAA GTACTACTGG CCAAGAATGA TTGGTACAAT GGTAGCTTGG
TTCTTGTACG ATTTTGTTAC TTTCCCTAAC GGTATCTTCT CTGCTGGTAT TATCGCCAAC
GTTATTCCAG CATCTGAAAA GAATAACTTG GAATTGATTG CCGAATGGAA CTTGTTGATT
GGTGCACTTG CCTTGCCAGG TGTTTTCATC GGTGCTTACT TGAATGATGT TATCGGTAGA
AAGTACACTA TCATGCTTGG TTTCAGTGGT TATATTGTCT TTGGTTTGAT TGTTGGCTTG
GCTTACAACA AGGTGAAACA TATCACTGCT CTCTTCATTG TCTTGTACGG TTTAATGATG
TCCTGTGGTA ACATGGGTCC AGGTGACGGT ATGGGTTTGA TTTCATCTGA ATCTTACGCT
ACACCAATCA GAGGAACTGC CTATGGCCTT TCTGCCGCAA TTGGTAAAGT TGGTGCTGTT
GTTGGTACTA AGACCTTCAC TCCTATCCAA ACTAACTTGG GTGACAGATG GACTTTCATT
ATCGCTGCTA TTTGTGGTTT GGCCGGTGTC TTGGTTACCT TCTTCTTCAT TCCTCACTTG
AAGGAAGAAG ATTTGTTAGA GGAAGATGTT AAGTTCAAGA ACTACTTGCT TGAAAATGGC
TGGAAGGGTC ACTTCGGTAT TCCATCTGAA AACAACGAAG AAGAAGACCT TGAATCTACC
GACGATGACT TCTCTGTCAA GAAATAA
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| Protein sequence | MNTDDLRDNK NTSIVKQDYI ETTEIPQHDG KRFKYDADLR RQRLAGGAKL KDVLMILCAG
FALISDGYQN NVMSMLNKVF AIEYPKEYTA SMSTSVSNAS LVGTILGQVA IGLTCDYLGR
KWSIITATLF LILGTVLCAA AHGATVNGMF WMLIICRGVT GFGIGAEYPS SSVTASEAAN
ESVRRRGGAF ILCTNLPLSF GGPFALIIFL IVHKITGKHY EGLWRTMFAI GAFWPLSIFY
FRLKMSTSVL YKKSAIKQVA PYWLAIKYYW PRMIGTMVAW FLYDFVTFPN GIFSAGIIAN
VIPASEKNNL ELIAEWNLLI GALALPGVFI GAYLNDVIGR KYTIMLGFSG YIVFGLIVGL
AYNKVKHITA LFIVLYGLMM SCGNMGPGDG MGLISSESYA TPIRGTAYGL SAAIGKVGAV
VGTKTFTPIQ TNLGDRWTFI IAAICGLAGV LVTFFFIPHL KEEDLLEEDV KFKNYLLENG
WKGHFGIPSE NNEEEDLEST DDDFSVKK
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