Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_19605 |
Symbol | |
ID | 4837676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 560565 |
End bp | 561689 |
Gene Length | 1125 bp |
Protein Length | 375 aa |
Translation table | 12 |
GC content | 36% |
IMG OID | 640388991 |
Product | predicted protein |
Protein accession | XP_001383385 |
Protein GI | 150864533 |
COG category | [R] General function prediction only |
COG ID | [COG2940] Proteins containing SET domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ACGAATGTGA CTTCCGAAGA CGTAACTGCA TATTTGAATC AAATATCTCC ATATTTCAAA GTAGATAAGA CAAAGTATGG AGGCAGAGGG TGTTTTTCAT ACTCTGAAAT ACCAGCTGGA ACAGTGCTCT TAACTTGCGA GCAGTCGTTA AGTTCAACCA TAGTAAAACC TTTCAGGAAG GAAGCATGTA CTTTTTGTTT CTCGTACTAC GATGGAAGAA TCCTCAAGCT GAAAATCCAA AAGAAGTTTG GTAAAGATGT AGTTTCTTTG TTCTTCTGCT CTGAAAAATG CAAGGAACAG TTTTGCAATC AGGACATAGA TGATATATAC CAGGATTCTC TTTTGGAAGT GGAAAAACAT TATATCAATG GATTGAATAA ACATGAAGAA GAACTCAAAG AACCACCAAA GAATATGGAT TTGGACGAAG TCATTAAGCA GGAGTGGGTA AACGTTTCAT TATGGGAAAA GAAAGTTTCA TCTACAAAAG CTTCCAAAAG AGCCAATATG ATCCCCAGAA TATCTGATAG TGAATACATA GAAATCAAAT ATGTCATTGG AGTCCTCTTC AAGTTGTTTT CTAATGAGAA AAACCAGACC ACATTGAGTA TAAATCAATA TTTGCATGAA TTGCCAAGAT GTGAAAGAGA CCTCTTTGAA TTGAATCTTT TCCGCATTTT ACAATCAACT GAGTTAGAAA AGGTACACAA GTATCCGTAT CTTTTGTATT CCTATATCAA CATCTATAAA TTCATAAAGC TAACTGCTCT ACCTCCATTG CAGCCTTTCA TCACTTCTGA TTTGGTGAGA TCTTCCATCG GAAGAAATAT TTCCAATGCC TTTGGCATTT GGTCCGATTC CAGTTCTTCT GAAGAGGAAA GAGAATACTT TGGATTTGGA GTATACCCAT CTGCATCTTA TTTCAATCAT TCATGTGGAC CCAACGTAGT TAAGAAAAGA ATCGAGAACA AATTGACATT CACAACCTTG AGAGATATTT CAGCTGGTGA AGAACTCTGT ATCGACTACG GTAATTACAT CAATGAACCG GTGGAGGTAA GGCAAAAGGA ATTGAGTGAA TGGTTCTTTA ATTGTGGTTG TGACAAATGT GTTGCTGAAC TTCAA
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Protein sequence | TNVTSEDVTA YLNQISPYFK VDKTKYGGRG CFSYSEIPAG TVLLTCEQSL SSTIVKPFRK EACTFCFSYY DGRILKSKIQ KKFGKDVVSL FFCSEKCKEQ FCNQDIDDIY QDSLLEVEKH YINGLNKHEE ELKEPPKNMD LDEVIKQEWV NVSLWEKKVS STKASKRANM IPRISDSEYI EIKYVIGVLF KLFSNEKNQT TLSINQYLHE LPRCERDLFE LNLFRILQST ELEKVHKYPY LLYSYINIYK FIKLTALPPL QPFITSDLVR SSIGRNISNA FGIWSDSSSS EEEREYFGFG VYPSASYFNH SCGPNVVKKR IENKLTFTTL RDISAGEELC IDYGNYINEP VEVRQKELSE WFFNCGCDKC VAELQ
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