| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_55837 |
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| Symbol | |
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| ID | 4837282 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 1925731 |
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| End bp | 1927149 |
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| Gene Length | 1419 bp |
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| Protein Length | 453 aa |
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| Translation table | 12 |
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| GC content | 49% |
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| IMG OID | 640388597 |
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| Product | predicted protein |
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| Protein accession | XP_001383142 |
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| Protein GI | 126133234 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0724] RNA-binding proteins (RRM domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.876442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CAGCACGACG TTGCTGCTGA AGCTCCCGCT GCTCCTGCCG AATCGGAATC CGAACCTTCT
GCTCCTGCCG CCGTTTCTGT TGCTGAGCAA CCAGAAACTG AACAGGCTTC CATTGAAAAC
CCAACTGAGC AGAAGACCAT TGCTGAGCAA AACCAGGTTC AAGTCCAAGC TCCCAATGCT
GAACCTGCGC CAGCCCCAGC CAGTGCTCTC GAAGGAGGAC GTGAGGTGTC CAAGAAGATC
TTGTATGTTG GAGGCTTGCA CAAGTCTGTT ACTGACGACA TGTTGAAGGA CTTGTTCTCT
GTAGCAGGCG GTATCAAGTC GGTGAAGATC TTGAATGATA AGAATAAGCC TGGATTCAAC
TATGCCTTCA TTGAATTTGA CACTAATCAG GCTGCTGATA TGGCTTTGCA TACATTGAAT
GGCCGTATCA TCAACAATTC TGAGATCAAG ATAAATTGGG CTTTCCAATC TTCGACGATC
AACACGGCTG CTCACCCTGA CGAACCTACT TTTAACATTT TTGTCGGAGA TTTATCGCCG
GAAGTTGACG ACGAAACGTT GACAAGGGCC TTTTCCAAGT TCCAGACGTT GAAGCAGGCC
CATGTTATGT GGGACATGCA AACGTCAAGA TCCCGTGGCT ATGGGTTTGT AACTTTTGGA
ACGCAGGCCG ATGCCGAGTT AGCCTTACAG ACCATGAACG GTGAGTGGAT TAACGGTAGA
GCCATCAGAT GTAACTGGGC TTCTCACAAG CAGATGAACG GTAACAACGG AGGCAACTAC
CGTAACAACC GTCATCTCCA TCACCACAAT AATAACAATA ATAACAATAG TAACCGTGGC
CAGTTTAGAC CATTCAACAC CAACGGCATA CCTCAACAGC AGATGGGCAA TGCCAACGGA
GGTTTGAGCA ACGGCCAGTT CCAGCCGCAG GGAGGTATTC CACAAAACTT ACAGCCTAAT
GCTCCTGGCG GAGGTGTGTT TTCGCCTTCC AATCTTGGAG CTAACGGTAG CGGCGGTCCT
GGTGCTGGAA ATGTCGCTAA TGGAGCTTCT GGTCAAGCCA ATATCCCCGT AATGTCTCCC
CAATCGTACG ACATTGTTTT GAGACAGACT CCCTCTTGGC AAACCACAGT GTATTTGGGT
AATATCGCCC ATTTCACCCA GCAGAACGAG TTGATTCCAT TATTACAAAA CTTTGGCTTC
ATTGTAGATT TCAAGTTCCA TCCGGAAAGA GGTTGCGCCT TTGTTAAGTA CGACTCGCAT
GAACGTGCCG CTTTGGCCAT TGTGCAATTG GCTGGTTTCA CCGTCAATGG CAGACCGTTG
AAGTGTGGCT GGGGGAAGGA TAGACCTCCT ATGGGCCAGT TCCAGAACTT CGGCCGCGGC
GTACCTCCTC CTCCAATGTA TGGTCAGGGA AGACCATAA
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| Protein sequence | QHDVAAEAPA APAESESEPS APAAVSVAEQ PETEQASIEN PTEQKTIAEQ NQVQVQAPNA
EPAPAPASAL EGGREVSKKI LYVGGLHKSV TDDMLKDLFS VAGGIKSVKI LNDKNKPGFN
YAFIEFDTNQ AADMALHTLN GRIINNSEIK INWAFQSSTI NTAAHPDEPT FNIFVGDLSP
EVDDETLTRA FSKFQTLKQA HVMWDMQTSR SRGYGFVTFG TQADAELALQ TMNGEWINGR
AIRCNWASHK QMNGNNGGNY RNNRHLHHHN NNNNNNSNRG QFRPFNTNGI PQQQMGNANG
GLSNGQFQPQ GGIPQNLQPN APGGANGSGA SGQANIPVMS PQSYDIVLRQ TPSWQTTVYL
GNIAHFTQQN ELIPLLQNFG FIVDFKFHPE RGCAFVKYDS HERAALAIVQ LAGFTVNGRP
LKCGWGKDRP PMGQFQNFGR GVPPPPMYGQ GRP
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