| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2961 |
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| Symbol | |
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| ID | 4810849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 3478233 |
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| End bp | 3479858 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640108383 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001039351 |
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| Protein GI | 125975441 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAGAA TCTTGGCACT TACAATTACA CTTGTAATCG TTGCAACAGT ATTAACAGGC
TGCGGAAAAA CACAGAACAA AACATCAACA TCAAACCAAG TCATTCGTGC GACTATTGCA
TCCGAGCCAA AAACCCTGGA TCCGTCCCGC AACAATGCAG TTGATGGCGG CAACTATATT
TTATGTGCAT TTGAAGGACT GACCACGCTA GGCAAAGACG GCACCATTGT TGCAGGAACG
GCTGAAAGAT GGGAAACAAG TGATGACGGG CTTGTTTGGA CATTCTACAT CCGCAAGGAT
GCAAAGTGGT CTGACGGCAA GGATGTAACT GCAAACGATT TTGTTTATTC CTGGAGAAGG
CTCGTTGATC CGGCAACAGC CGCCGATTAT GCGTATTACG CTTATTTCAT AAAAAACGGT
GAAAAAATCA ACGCCGGTGA AGCCGACGTC AGTACGTTGG GTGTTCGGGC TGTCAACGAT
AAAACCCTTG AGGTAACCCT TGAAAGCCCA TGTCCGTTCT TTACCGAAAT AGTTGCCTTC
CCTGCTCTCG TTCCTCTCAG GGAAGATATT ATATCCGCCA ATAAAGACAA GTGGGCGCTT
GAACCGTCTA CTTATATAGG CAACGGACCT TACAAACTGA CCAGCTGGGA CCATGATTCA
AAAATTGTAT TTGAAAAGAA TGAAAACTAC TGGGACAAAA ATAATGTAAT TGCACCTAAA
ATCGAATGGT ATCTGATGAA TGACCAGAAT GCCATCTTAA GCGCATTTAA AAACGGACAA
GTTGCCTATG CAAAGAATAT TCCTTCGGAT GAGCTGGCTG CTGAAAAAGC AGCAGGTAAT
CTGAAAATTT TTCCGTTAAT TGGAACATAT TATATAGACT TTGTAAACAA TAAACCTCCT
TTTAACGATG TAAGGGTAAG AAAAGCGTTT TCTCTGGCAA TTGACCGCAA CTACCTGGTA
GAAAACGTCA AAAAAGGTGG TGAAACTCCG GCAACAGCTT TTGTACCATA CGGTATAGCT
GACGTTAATC CGGAACCCGA CTTCCGCACA GTAGGCGGCG ACTATATTTC AGTAAAACCT
GAAGATTACG AAAAGAATGT GGCTGAAGCC AAAAGGCTTC TTGCTGAGGC AGGTTACCCG
GACGGAAAAG GATTCCCGAA AATTACTTTT GGTCTGAACT CAGGTGCGGG TCATGAGCCT
ATAGCTGAAG CTTTGCAGCA GATGTGGAAG GAAAATCTGG GTGTTGAAGT TGAAATCCTG
GCTCAGGAAT GGAATGTATT CCAGCAGTCA CGAAAAGACG GCGTTTACAA TATAAACAGA
AACGGTTGGA TCGGAGACTA TATGGATCCG TCAACTTTCA TGGACATATT TACAACCGGA
AACGGTCAGA ATAATGCCAT GTACAGCAAT CCAAAGTATG ATGAACTTAT TTCCGCAGCA
AGAAGAGAAA CTGACCCGGC TAAACGCATT CAAATGTACC ATGATGCGGA AAAGATACTT
ATGGATGACG CCGCAATAGC TCCTTTGTAC TTCTATACTG ATCCTATAGT CATATCACCG
AATCTTAAGG GAGTGTTACA TTCACAACTT GGTTTCGTAA TCTTCAAATG GGCATATTTT
GAATAG
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| Protein sequence | MKRILALTIT LVIVATVLTG CGKTQNKTST SNQVIRATIA SEPKTLDPSR NNAVDGGNYI
LCAFEGLTTL GKDGTIVAGT AERWETSDDG LVWTFYIRKD AKWSDGKDVT ANDFVYSWRR
LVDPATAADY AYYAYFIKNG EKINAGEADV STLGVRAVND KTLEVTLESP CPFFTEIVAF
PALVPLREDI ISANKDKWAL EPSTYIGNGP YKLTSWDHDS KIVFEKNENY WDKNNVIAPK
IEWYLMNDQN AILSAFKNGQ VAYAKNIPSD ELAAEKAAGN LKIFPLIGTY YIDFVNNKPP
FNDVRVRKAF SLAIDRNYLV ENVKKGGETP ATAFVPYGIA DVNPEPDFRT VGGDYISVKP
EDYEKNVAEA KRLLAEAGYP DGKGFPKITF GLNSGAGHEP IAEALQQMWK ENLGVEVEIL
AQEWNVFQQS RKDGVYNINR NGWIGDYMDP STFMDIFTTG NGQNNAMYSN PKYDELISAA
RRETDPAKRI QMYHDAEKIL MDDAAIAPLY FYTDPIVISP NLKGVLHSQL GFVIFKWAYF
E
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