| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2721 |
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| Symbol | rplA |
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| ID | 4810715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 3208955 |
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| End bp | 3209650 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640108140 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_001039113 |
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| Protein GI | 125975203 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000127574 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAGAG GCAAGAAATA TCAGGAAAGT GTAAAATTGG TTGATAAAAC AAAGCTGTAT
GATCCTGTAG AGGCAATGGA ACTTGTGCAA AAGACAGCCA AGGCAAAGTT TGATGAAACT
GTGGAGGCAC ATATCAGACT CGGTGTTGAC TCAAGACATG CCGATCAGCA GGTAAGAGGC
GCCGTTGTTT TGCCGCACGG TACAGGTAAG AAAGTAAGAG TTCTTGTTTT TGCGAAAGGT
GAAAAAGCCA CAGAAGCAGA AAAAGCCGGT GCGGATTATG TTGGTGCAGA GGAATTGGTT
TCAAAGATTC AGAATGAAAA CTGGTTTGAG TTTGACGTTG TAGTTGCAAC ACCGGATATG
ATGGGTGTTG TAGGTAGACT CGGTAAAGTG CTTGGTCCGA AAGGATTAAT GCCAAACCCA
AAAGCCGGTA CCGTAACAAT GGATGTGGCC AAGGCAATTG CCGACATCAA AGCCGGTAAA
ATTGAGTACA GGCTGGATAA GACCAACATT ATACACTGCC CTATAGGAAA AGTGTCCTTT
GGTACCGAAA AGCTTGTTGA CAATTTCCGC ACATTGATGT CAGCAATAAT CAAGGCTAAA
CCTGCAGCAG CAAAAGGCCA GTATCTTAAG AGTGTGGTTG TTACTTCCAC AATGGGACCT
GGCATAAAAG TAAATCCTTT AAGAGTAAGT GAATAA
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| Protein sequence | MKRGKKYQES VKLVDKTKLY DPVEAMELVQ KTAKAKFDET VEAHIRLGVD SRHADQQVRG
AVVLPHGTGK KVRVLVFAKG EKATEAEKAG ADYVGAEELV SKIQNENWFE FDVVVATPDM
MGVVGRLGKV LGPKGLMPNP KAGTVTMDVA KAIADIKAGK IEYRLDKTNI IHCPIGKVSF
GTEKLVDNFR TLMSAIIKAK PAAAKGQYLK SVVVTSTMGP GIKVNPLRVS E
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