Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2358 |
Symbol | |
ID | 4808992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 2812608 |
End bp | 2813261 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640107765 |
Product | accessory gene regulator B |
Protein accession | YP_001038753 |
Protein GI | 125974843 |
COG category | [K] Transcription [O] Posttranslational modification, protein turnover, chaperones [T] Signal transduction mechanisms |
COG ID | [COG4512] Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000360105 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGTTCA TTAATGCTTT ATCATACAAG AGTGCCGACT ACTTAATGAG GCAGATGAAT GGCAATCATG AAAGCAGAAG GGTTTACTAC TATGGCTTTC AGATTGTGAT AGGTGCGCTG TTTAAAGGCT TGTTACTTCT GCTGTTGGCC TTTATAACCG GTACAATGCT TCCGGCTTTG ACGATAGTAG CGGCATTTGT AATACTAAGG TCAATTGCCG GGGGATACCA TATGAAGACA TACGGAAAAT GTATAGCGGC CTCTTTGGGT ATGATTATTC TTGCGGCACT GATTTCCAAA TATACAGCTC ATATGTTGAA TCAAATTTCG TTAATAGCGA TCGTAGTACT ATCATTTGTC TTTTCATCAG CTTCTCTCAT AAAATGGGCT CCTGCCGATA ATCCGAACAG ACCGATTACC GACAAAAAAG AAATCAAAAA GTTTAGGATA CTGTCAATGA TTTATATTGT AATTTGGCTT GTTTTGAGTC TGACTTTGGT TTATTTCAAG CAAAATATGT TTGTGCTGGC ACTTTGCCTG GGAGTGATTT TAGAAGTCTT TTCAATAACA CCTGCAGGAA TAAGATTTTT TAAAATGATT GAGAAGGGCA TGGATTCGGT AAAAAATGAT ATAAACAGGC ACTCCTCAAA ATGA
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Protein sequence | MRFINALSYK SADYLMRQMN GNHESRRVYY YGFQIVIGAL FKGLLLLLLA FITGTMLPAL TIVAAFVILR SIAGGYHMKT YGKCIAASLG MIILAALISK YTAHMLNQIS LIAIVVLSFV FSSASLIKWA PADNPNRPIT DKKEIKKFRI LSMIYIVIWL VLSLTLVYFK QNMFVLALCL GVILEVFSIT PAGIRFFKMI EKGMDSVKND INRHSSK
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